Protein–RNA interactions for Protein: Q9UHC9

NPC1L1, Niemann-Pick C1-like protein 1, humanhuman

Predictions only

Length 1,359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1Q9UHC9 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
NPC1L1Q9UHC9 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
NPC1L1Q9UHC9 FTH1-202ENST00000526640 786 ntTSL 2 BASIC21.56■■□□□ 1.04
NPC1L1Q9UHC9 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC21.56■■□□□ 1.04
NPC1L1Q9UHC9 RNA5-8SN1-201ENST00000610460 153 ntBASIC21.56■■□□□ 1.04
NPC1L1Q9UHC9 RNA5-8SN5-202ENST00000612463 153 ntBASIC21.56■■□□□ 1.04
NPC1L1Q9UHC9 RNA5-8SN4-201ENST00000613359 153 ntBASIC21.56■■□□□ 1.04
NPC1L1Q9UHC9 RNA5-8SN5-201ENST00000619471 153 ntBASIC21.56■■□□□ 1.04
NPC1L1Q9UHC9 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
NPC1L1Q9UHC9 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
NPC1L1Q9UHC9 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC21.56■■□□□ 1.04
NPC1L1Q9UHC9 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC21.56■■□□□ 1.04
NPC1L1Q9UHC9 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC21.56■■□□□ 1.04
NPC1L1Q9UHC9 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
NPC1L1Q9UHC9 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
NPC1L1Q9UHC9 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
NPC1L1Q9UHC9 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC21.55■■□□□ 1.04
NPC1L1Q9UHC9 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC21.55■■□□□ 1.04
NPC1L1Q9UHC9 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
NPC1L1Q9UHC9 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
NPC1L1Q9UHC9 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
NPC1L1Q9UHC9 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
NPC1L1Q9UHC9 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC21.55■■□□□ 1.04
NPC1L1Q9UHC9 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC21.55■■□□□ 1.04
NPC1L1Q9UHC9 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
NPC1L1Q9UHC9 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC21.55■■□□□ 1.04
NPC1L1Q9UHC9 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
NPC1L1Q9UHC9 CALY-202ENST00000368555 783 ntTSL 2 BASIC21.55■■□□□ 1.04
NPC1L1Q9UHC9 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
NPC1L1Q9UHC9 AC015922.1-201ENST00000421102 1152 ntBASIC21.55■■□□□ 1.04
NPC1L1Q9UHC9 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC21.55■■□□□ 1.04
NPC1L1Q9UHC9 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC21.55■■□□□ 1.04
NPC1L1Q9UHC9 USP40-206ENST00000443711 628 ntTSL 2 BASIC21.55■■□□□ 1.04
NPC1L1Q9UHC9 STOM-203ENST00000538954 1257 ntTSL 5 BASIC21.55■■□□□ 1.04
NPC1L1Q9UHC9 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC21.55■■□□□ 1.04
NPC1L1Q9UHC9 SRD5A3P1-201ENST00000603021 949 ntBASIC21.55■■□□□ 1.04
NPC1L1Q9UHC9 AC009118.2-201ENST00000613275 655 ntBASIC21.55■■□□□ 1.04
NPC1L1Q9UHC9 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
NPC1L1Q9UHC9 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
NPC1L1Q9UHC9 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
NPC1L1Q9UHC9 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
NPC1L1Q9UHC9 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
NPC1L1Q9UHC9 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
NPC1L1Q9UHC9 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
NPC1L1Q9UHC9 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
NPC1L1Q9UHC9 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
NPC1L1Q9UHC9 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC21.54■■□□□ 1.04
NPC1L1Q9UHC9 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
NPC1L1Q9UHC9 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC21.54■■□□□ 1.04
NPC1L1Q9UHC9 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC21.54■■□□□ 1.04
NPC1L1Q9UHC9 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
NPC1L1Q9UHC9 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
NPC1L1Q9UHC9 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
NPC1L1Q9UHC9 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
NPC1L1Q9UHC9 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
NPC1L1Q9UHC9 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
NPC1L1Q9UHC9 AC135586.1-201ENST00000539323 574 ntBASIC21.54■■□□□ 1.04
NPC1L1Q9UHC9 AC104794.3-201ENST00000566840 1248 ntBASIC21.54■■□□□ 1.04
NPC1L1Q9UHC9 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC21.54■■□□□ 1.04
NPC1L1Q9UHC9 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC21.54■■□□□ 1.04
NPC1L1Q9UHC9 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
NPC1L1Q9UHC9 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC21.54■■□□□ 1.04
NPC1L1Q9UHC9 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
NPC1L1Q9UHC9 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC21.54■■□□□ 1.04
NPC1L1Q9UHC9 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC21.54■■□□□ 1.04
NPC1L1Q9UHC9 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
NPC1L1Q9UHC9 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
NPC1L1Q9UHC9 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
NPC1L1Q9UHC9 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
NPC1L1Q9UHC9 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC21.54■■□□□ 1.04
NPC1L1Q9UHC9 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
NPC1L1Q9UHC9 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC21.54■■□□□ 1.04
NPC1L1Q9UHC9 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
NPC1L1Q9UHC9 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
NPC1L1Q9UHC9 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC21.53■■□□□ 1.04
NPC1L1Q9UHC9 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC21.53■■□□□ 1.04
NPC1L1Q9UHC9 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC21.53■■□□□ 1.04
NPC1L1Q9UHC9 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC21.53■■□□□ 1.04
NPC1L1Q9UHC9 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
NPC1L1Q9UHC9 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
NPC1L1Q9UHC9 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
NPC1L1Q9UHC9 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
NPC1L1Q9UHC9 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC21.53■■□□□ 1.04
NPC1L1Q9UHC9 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC21.53■■□□□ 1.04
NPC1L1Q9UHC9 AL512638.1-201ENST00000457493 794 ntBASIC21.53■■□□□ 1.04
NPC1L1Q9UHC9 SERBP1P5-201ENST00000510079 1181 ntBASIC21.53■■□□□ 1.04
NPC1L1Q9UHC9 RN7SL204P-201ENST00000582831 262 ntBASIC21.53■■□□□ 1.04
NPC1L1Q9UHC9 YTHDF3-AS1-201ENST00000603538 718 ntBASIC21.53■■□□□ 1.04
NPC1L1Q9UHC9 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
NPC1L1Q9UHC9 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
NPC1L1Q9UHC9 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
NPC1L1Q9UHC9 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC21.53■■□□□ 1.04
NPC1L1Q9UHC9 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
NPC1L1Q9UHC9 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC21.53■■□□□ 1.04
NPC1L1Q9UHC9 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC21.53■■□□□ 1.04
NPC1L1Q9UHC9 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
NPC1L1Q9UHC9 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
NPC1L1Q9UHC9 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
NPC1L1Q9UHC9 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
NPC1L1Q9UHC9 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms