Protein–RNA interactions for Protein: Q9UBN7

HDAC6, Histone deacetylase 6, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6Q9UBN7 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HDAC6Q9UBN7 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
HDAC6Q9UBN7 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
HDAC6Q9UBN7 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC18.34■□□□□ 0.53
HDAC6Q9UBN7 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC18.34■□□□□ 0.53
HDAC6Q9UBN7 CROCCP1-201ENST00000426910 5675 ntBASIC18.34■□□□□ 0.53
HDAC6Q9UBN7 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HDAC6Q9UBN7 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HDAC6Q9UBN7 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC18.34■□□□□ 0.53
HDAC6Q9UBN7 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HDAC6Q9UBN7 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
HDAC6Q9UBN7 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
HDAC6Q9UBN7 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HDAC6Q9UBN7 PIN1P1-201ENST00000412108 996 ntBASIC18.34■□□□□ 0.53
HDAC6Q9UBN7 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC18.34■□□□□ 0.53
HDAC6Q9UBN7 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC18.34■□□□□ 0.53
HDAC6Q9UBN7 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
HDAC6Q9UBN7 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
HDAC6Q9UBN7 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
HDAC6Q9UBN7 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
HDAC6Q9UBN7 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC18.34■□□□□ 0.53
HDAC6Q9UBN7 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC18.34■□□□□ 0.53
HDAC6Q9UBN7 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC18.34■□□□□ 0.53
HDAC6Q9UBN7 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HDAC6Q9UBN7 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC18.34■□□□□ 0.53
HDAC6Q9UBN7 SNX33P1-201ENST00000592116 1762 ntBASIC18.34■□□□□ 0.53
HDAC6Q9UBN7 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC18.34■□□□□ 0.53
HDAC6Q9UBN7 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC18.34■□□□□ 0.53
HDAC6Q9UBN7 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HDAC6Q9UBN7 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
HDAC6Q9UBN7 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
HDAC6Q9UBN7 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
HDAC6Q9UBN7 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC18.33■□□□□ 0.53
HDAC6Q9UBN7 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
HDAC6Q9UBN7 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
HDAC6Q9UBN7 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
HDAC6Q9UBN7 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC18.33■□□□□ 0.53
HDAC6Q9UBN7 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
HDAC6Q9UBN7 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC18.33■□□□□ 0.53
HDAC6Q9UBN7 OR6D1P-203ENST00000641209 4860 ntBASIC18.33■□□□□ 0.53
HDAC6Q9UBN7 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
HDAC6Q9UBN7 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
HDAC6Q9UBN7 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
HDAC6Q9UBN7 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
HDAC6Q9UBN7 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.52
HDAC6Q9UBN7 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC18.33■□□□□ 0.52
HDAC6Q9UBN7 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
HDAC6Q9UBN7 AL353705.2-201ENST00000428243 662 ntBASIC18.33■□□□□ 0.52
HDAC6Q9UBN7 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC18.33■□□□□ 0.52
HDAC6Q9UBN7 MTND6P24-201ENST00000440466 518 ntBASIC18.33■□□□□ 0.52
HDAC6Q9UBN7 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
HDAC6Q9UBN7 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
HDAC6Q9UBN7 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.52
HDAC6Q9UBN7 SPDYE22P-201ENST00000582158 798 ntBASIC18.33■□□□□ 0.52
HDAC6Q9UBN7 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC18.33■□□□□ 0.52
HDAC6Q9UBN7 AL662799.1-202ENST00000614205 422 ntBASIC18.33■□□□□ 0.52
HDAC6Q9UBN7 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
HDAC6Q9UBN7 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC18.33■□□□□ 0.52
HDAC6Q9UBN7 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
HDAC6Q9UBN7 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC18.33■□□□□ 0.52
HDAC6Q9UBN7 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC18.33■□□□□ 0.52
HDAC6Q9UBN7 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC18.33■□□□□ 0.52
HDAC6Q9UBN7 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
HDAC6Q9UBN7 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
HDAC6Q9UBN7 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
HDAC6Q9UBN7 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC18.33■□□□□ 0.52
HDAC6Q9UBN7 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC18.33■□□□□ 0.52
HDAC6Q9UBN7 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
HDAC6Q9UBN7 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC18.33■□□□□ 0.52
HDAC6Q9UBN7 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HDAC6Q9UBN7 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
HDAC6Q9UBN7 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HDAC6Q9UBN7 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
HDAC6Q9UBN7 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
HDAC6Q9UBN7 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC18.32■□□□□ 0.52
HDAC6Q9UBN7 AL035456.1-201ENST00000456064 1369 ntBASIC18.32■□□□□ 0.52
HDAC6Q9UBN7 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
HDAC6Q9UBN7 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
HDAC6Q9UBN7 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HDAC6Q9UBN7 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
HDAC6Q9UBN7 GOLGA2P9-201ENST00000596977 1937 ntBASIC18.32■□□□□ 0.52
HDAC6Q9UBN7 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
HDAC6Q9UBN7 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HDAC6Q9UBN7 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
HDAC6Q9UBN7 TMPRSS11CP-201ENST00000453277 683 ntBASIC18.32■□□□□ 0.52
HDAC6Q9UBN7 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HDAC6Q9UBN7 AC098859.1-201ENST00000502915 1238 ntBASIC18.32■□□□□ 0.52
HDAC6Q9UBN7 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC18.32■□□□□ 0.52
HDAC6Q9UBN7 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
HDAC6Q9UBN7 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC18.32■□□□□ 0.52
HDAC6Q9UBN7 QPRT-203ENST00000562473 579 ntTSL 3 BASIC18.32■□□□□ 0.52
HDAC6Q9UBN7 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC18.32■□□□□ 0.52
HDAC6Q9UBN7 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HDAC6Q9UBN7 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC18.32■□□□□ 0.52
HDAC6Q9UBN7 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
HDAC6Q9UBN7 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC18.32■□□□□ 0.52
HDAC6Q9UBN7 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
HDAC6Q9UBN7 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
HDAC6Q9UBN7 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HDAC6Q9UBN7 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms