Protein–RNA interactions for Protein: Q9NWD8

TMEM248, Transmembrane protein 248, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248Q9NWD8 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
TMEM248Q9NWD8 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC16.51■□□□□ 0.23
TMEM248Q9NWD8 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TMEM248Q9NWD8 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC16.51■□□□□ 0.23
TMEM248Q9NWD8 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
TMEM248Q9NWD8 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TMEM248Q9NWD8 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TMEM248Q9NWD8 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC16.51■□□□□ 0.23
TMEM248Q9NWD8 CYMP-203ENST00000474680 1263 ntBASIC16.51■□□□□ 0.23
TMEM248Q9NWD8 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC16.51■□□□□ 0.23
TMEM248Q9NWD8 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TMEM248Q9NWD8 DUX4L27-201ENST00000554796 1261 ntBASIC16.51■□□□□ 0.23
TMEM248Q9NWD8 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
TMEM248Q9NWD8 AC093512.1-201ENST00000617969 520 ntBASIC16.51■□□□□ 0.23
TMEM248Q9NWD8 AC073592.8-201ENST00000624126 511 ntBASIC16.51■□□□□ 0.23
TMEM248Q9NWD8 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TMEM248Q9NWD8 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TMEM248Q9NWD8 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TMEM248Q9NWD8 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
TMEM248Q9NWD8 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TMEM248Q9NWD8 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
TMEM248Q9NWD8 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TMEM248Q9NWD8 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC16.51■□□□□ 0.23
TMEM248Q9NWD8 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC16.51■□□□□ 0.23
TMEM248Q9NWD8 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TMEM248Q9NWD8 FO538757.1-201ENST00000623083 1397 ntBASIC16.51■□□□□ 0.23
TMEM248Q9NWD8 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC16.5■□□□□ 0.23
TMEM248Q9NWD8 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TMEM248Q9NWD8 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TMEM248Q9NWD8 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TMEM248Q9NWD8 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC16.5■□□□□ 0.23
TMEM248Q9NWD8 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TMEM248Q9NWD8 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
TMEM248Q9NWD8 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
TMEM248Q9NWD8 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
TMEM248Q9NWD8 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TMEM248Q9NWD8 MIR943-201ENST00000401286 94 ntBASIC16.5■□□□□ 0.23
TMEM248Q9NWD8 AL080243.2-201ENST00000418783 582 ntBASIC16.5■□□□□ 0.23
TMEM248Q9NWD8 TREML5P-201ENST00000421694 576 ntBASIC16.5■□□□□ 0.23
TMEM248Q9NWD8 AC092580.3-201ENST00000430932 139 ntBASIC16.5■□□□□ 0.23
TMEM248Q9NWD8 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
TMEM248Q9NWD8 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TMEM248Q9NWD8 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC16.5■□□□□ 0.23
TMEM248Q9NWD8 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
TMEM248Q9NWD8 AC027796.2-201ENST00000575326 344 ntBASIC16.5■□□□□ 0.23
TMEM248Q9NWD8 AL138828.2-201ENST00000615812 383 ntBASIC16.5■□□□□ 0.23
TMEM248Q9NWD8 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC16.5■□□□□ 0.23
TMEM248Q9NWD8 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC16.5■□□□□ 0.23
TMEM248Q9NWD8 AC011477.6-201ENST00000604980 1927 ntBASIC16.5■□□□□ 0.23
TMEM248Q9NWD8 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC16.5■□□□□ 0.23
TMEM248Q9NWD8 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TMEM248Q9NWD8 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TMEM248Q9NWD8 KRT8P12-202ENST00000472924 1397 ntBASIC16.5■□□□□ 0.23
TMEM248Q9NWD8 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC16.5■□□□□ 0.23
TMEM248Q9NWD8 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
TMEM248Q9NWD8 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TMEM248Q9NWD8 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
TMEM248Q9NWD8 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TMEM248Q9NWD8 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
TMEM248Q9NWD8 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TMEM248Q9NWD8 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC16.49■□□□□ 0.23
TMEM248Q9NWD8 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
TMEM248Q9NWD8 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TMEM248Q9NWD8 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TMEM248Q9NWD8 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC16.49■□□□□ 0.23
TMEM248Q9NWD8 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC16.49■□□□□ 0.23
TMEM248Q9NWD8 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
TMEM248Q9NWD8 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TMEM248Q9NWD8 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC16.49■□□□□ 0.23
TMEM248Q9NWD8 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TMEM248Q9NWD8 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TMEM248Q9NWD8 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
TMEM248Q9NWD8 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TMEM248Q9NWD8 RPL37AP1-201ENST00000412502 279 ntBASIC16.49■□□□□ 0.23
TMEM248Q9NWD8 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC16.49■□□□□ 0.23
TMEM248Q9NWD8 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC16.49■□□□□ 0.23
TMEM248Q9NWD8 AC097493.3-201ENST00000509725 367 ntBASIC16.49■□□□□ 0.23
TMEM248Q9NWD8 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
TMEM248Q9NWD8 PRR29-209ENST00000582540 967 ntTSL 2 BASIC16.49■□□□□ 0.23
TMEM248Q9NWD8 AC112504.1-201ENST00000623415 1841 ntBASIC16.49■□□□□ 0.23
TMEM248Q9NWD8 IMPDH1P4-201ENST00000445028 1534 ntBASIC16.49■□□□□ 0.23
TMEM248Q9NWD8 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TMEM248Q9NWD8 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TMEM248Q9NWD8 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC16.48■□□□□ 0.23
TMEM248Q9NWD8 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TMEM248Q9NWD8 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC16.48■□□□□ 0.23
TMEM248Q9NWD8 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
TMEM248Q9NWD8 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
TMEM248Q9NWD8 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
TMEM248Q9NWD8 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC16.48■□□□□ 0.23
TMEM248Q9NWD8 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
TMEM248Q9NWD8 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TMEM248Q9NWD8 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
TMEM248Q9NWD8 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
TMEM248Q9NWD8 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TMEM248Q9NWD8 KRT8P37-201ENST00000451609 1420 ntBASIC16.48■□□□□ 0.23
TMEM248Q9NWD8 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
TMEM248Q9NWD8 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC16.48■□□□□ 0.23
TMEM248Q9NWD8 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TMEM248Q9NWD8 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 80.4 ms