Protein–RNA interactions for Protein: Q9NRJ7

PCDHB16, Protocadherin beta-16, humanhuman

Predictions only

Length 776 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16Q9NRJ7 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC14.22□□□□□ -0.13
PCDHB16Q9NRJ7 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC14.22□□□□□ -0.13
PCDHB16Q9NRJ7 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
PCDHB16Q9NRJ7 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PCDHB16Q9NRJ7 HARS-203ENST00000431330 1774 ntTSL 2 BASIC14.22□□□□□ -0.13
PCDHB16Q9NRJ7 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC14.22□□□□□ -0.13
PCDHB16Q9NRJ7 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PCDHB16Q9NRJ7 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC14.21□□□□□ -0.13
PCDHB16Q9NRJ7 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC14.21□□□□□ -0.13
PCDHB16Q9NRJ7 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
PCDHB16Q9NRJ7 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
PCDHB16Q9NRJ7 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
PCDHB16Q9NRJ7 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC14.21□□□□□ -0.13
PCDHB16Q9NRJ7 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
PCDHB16Q9NRJ7 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC14.21□□□□□ -0.13
PCDHB16Q9NRJ7 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
PCDHB16Q9NRJ7 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
PCDHB16Q9NRJ7 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
PCDHB16Q9NRJ7 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
PCDHB16Q9NRJ7 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC14.21□□□□□ -0.13
PCDHB16Q9NRJ7 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC14.21□□□□□ -0.13
PCDHB16Q9NRJ7 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC14.21□□□□□ -0.13
PCDHB16Q9NRJ7 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
PCDHB16Q9NRJ7 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
PCDHB16Q9NRJ7 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
PCDHB16Q9NRJ7 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC14.21□□□□□ -0.13
PCDHB16Q9NRJ7 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
PCDHB16Q9NRJ7 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
PCDHB16Q9NRJ7 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC14.21□□□□□ -0.13
PCDHB16Q9NRJ7 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
PCDHB16Q9NRJ7 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC14.21□□□□□ -0.13
PCDHB16Q9NRJ7 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
PCDHB16Q9NRJ7 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
PCDHB16Q9NRJ7 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
PCDHB16Q9NRJ7 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC14.21□□□□□ -0.13
PCDHB16Q9NRJ7 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC14.21□□□□□ -0.13
PCDHB16Q9NRJ7 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC14.21□□□□□ -0.13
PCDHB16Q9NRJ7 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC14.21□□□□□ -0.13
PCDHB16Q9NRJ7 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
PCDHB16Q9NRJ7 BSG-214ENST00000614867 960 ntTSL 3 BASIC14.21□□□□□ -0.13
PCDHB16Q9NRJ7 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC14.21□□□□□ -0.13
PCDHB16Q9NRJ7 AL805961.1-202ENST00000641562 540 ntBASIC14.21□□□□□ -0.13
PCDHB16Q9NRJ7 TNRC18P2-201ENST00000417666 2714 ntBASIC14.21□□□□□ -0.13
PCDHB16Q9NRJ7 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
PCDHB16Q9NRJ7 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
PCDHB16Q9NRJ7 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
PCDHB16Q9NRJ7 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
PCDHB16Q9NRJ7 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
PCDHB16Q9NRJ7 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC14.21□□□□□ -0.14
PCDHB16Q9NRJ7 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
PCDHB16Q9NRJ7 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC14.21□□□□□ -0.14
PCDHB16Q9NRJ7 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC14.21□□□□□ -0.14
PCDHB16Q9NRJ7 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC14.21□□□□□ -0.14
PCDHB16Q9NRJ7 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC14.21□□□□□ -0.14
PCDHB16Q9NRJ7 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
PCDHB16Q9NRJ7 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
PCDHB16Q9NRJ7 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
PCDHB16Q9NRJ7 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC14.21□□□□□ -0.14
PCDHB16Q9NRJ7 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
PCDHB16Q9NRJ7 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
PCDHB16Q9NRJ7 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PCDHB16Q9NRJ7 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PCDHB16Q9NRJ7 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
PCDHB16Q9NRJ7 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PCDHB16Q9NRJ7 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC14.2□□□□□ -0.14
PCDHB16Q9NRJ7 AC092364.2-201ENST00000596710 2692 ntBASIC14.2□□□□□ -0.14
PCDHB16Q9NRJ7 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
PCDHB16Q9NRJ7 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PCDHB16Q9NRJ7 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC14.2□□□□□ -0.14
PCDHB16Q9NRJ7 PC-214ENST00000628663 1470 ntTSL 5 BASIC14.2□□□□□ -0.14
PCDHB16Q9NRJ7 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC14.2□□□□□ -0.14
PCDHB16Q9NRJ7 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
PCDHB16Q9NRJ7 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
PCDHB16Q9NRJ7 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC14.2□□□□□ -0.14
PCDHB16Q9NRJ7 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PCDHB16Q9NRJ7 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC14.2□□□□□ -0.14
PCDHB16Q9NRJ7 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PCDHB16Q9NRJ7 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
PCDHB16Q9NRJ7 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC14.2□□□□□ -0.14
PCDHB16Q9NRJ7 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
PCDHB16Q9NRJ7 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PCDHB16Q9NRJ7 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
PCDHB16Q9NRJ7 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC14.2□□□□□ -0.14
PCDHB16Q9NRJ7 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
PCDHB16Q9NRJ7 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PCDHB16Q9NRJ7 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC14.2□□□□□ -0.14
PCDHB16Q9NRJ7 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
PCDHB16Q9NRJ7 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
PCDHB16Q9NRJ7 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
PCDHB16Q9NRJ7 PTCHD3P3-201ENST00000403073 906 ntBASIC14.2□□□□□ -0.14
PCDHB16Q9NRJ7 TSPY19P-201ENST00000418461 509 ntBASIC14.2□□□□□ -0.14
PCDHB16Q9NRJ7 TSPY18P-201ENST00000441642 509 ntBASIC14.2□□□□□ -0.14
PCDHB16Q9NRJ7 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC14.2□□□□□ -0.14
PCDHB16Q9NRJ7 KRT18P31-201ENST00000506277 1292 ntBASIC14.2□□□□□ -0.14
PCDHB16Q9NRJ7 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC14.2□□□□□ -0.14
PCDHB16Q9NRJ7 SDHD-206ENST00000528182 754 ntTSL 3 BASIC14.2□□□□□ -0.14
PCDHB16Q9NRJ7 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC14.2□□□□□ -0.14
PCDHB16Q9NRJ7 RNF151-202ENST00000569210 853 ntTSL 2 BASIC14.2□□□□□ -0.14
PCDHB16Q9NRJ7 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC14.2□□□□□ -0.14
PCDHB16Q9NRJ7 CLEC4GP1-201ENST00000596555 870 ntBASIC14.2□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms