Protein–RNA interactions for Protein: Q9HD90

NEUROD4, Neurogenic differentiation factor 4, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEUROD4Q9HD90 AC068137.2-201ENST00000605408 478 ntBASIC15.36■□□□□ 0.05
NEUROD4Q9HD90 AC055717.3-201ENST00000622967 595 ntBASIC15.36■□□□□ 0.05
NEUROD4Q9HD90 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
NEUROD4Q9HD90 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC15.36■□□□□ 0.05
NEUROD4Q9HD90 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC15.36■□□□□ 0.05
NEUROD4Q9HD90 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
NEUROD4Q9HD90 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
NEUROD4Q9HD90 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
NEUROD4Q9HD90 AC073439.1-201ENST00000624121 1774 ntBASIC15.36■□□□□ 0.05
NEUROD4Q9HD90 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC15.36■□□□□ 0.05
NEUROD4Q9HD90 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC15.36■□□□□ 0.05
NEUROD4Q9HD90 LTF-203ENST00000426532 2494 ntTSL 2 BASIC15.36■□□□□ 0.05
NEUROD4Q9HD90 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC15.36■□□□□ 0.05
NEUROD4Q9HD90 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
NEUROD4Q9HD90 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
NEUROD4Q9HD90 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC15.35■□□□□ 0.05
NEUROD4Q9HD90 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
NEUROD4Q9HD90 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
NEUROD4Q9HD90 AP005117.1-202ENST00000581724 1908 ntBASIC15.35■□□□□ 0.05
NEUROD4Q9HD90 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
NEUROD4Q9HD90 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
NEUROD4Q9HD90 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
NEUROD4Q9HD90 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC15.35■□□□□ 0.05
NEUROD4Q9HD90 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC15.35■□□□□ 0.05
NEUROD4Q9HD90 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
NEUROD4Q9HD90 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
NEUROD4Q9HD90 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
NEUROD4Q9HD90 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
NEUROD4Q9HD90 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
NEUROD4Q9HD90 LBH-204ENST00000406087 559 ntTSL 4 BASIC15.35■□□□□ 0.05
NEUROD4Q9HD90 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC15.35■□□□□ 0.05
NEUROD4Q9HD90 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC15.35■□□□□ 0.05
NEUROD4Q9HD90 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC15.35■□□□□ 0.05
NEUROD4Q9HD90 KRT18P3-201ENST00000451602 1288 ntBASIC15.35■□□□□ 0.05
NEUROD4Q9HD90 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC15.35■□□□□ 0.05
NEUROD4Q9HD90 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC15.35■□□□□ 0.05
NEUROD4Q9HD90 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
NEUROD4Q9HD90 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
NEUROD4Q9HD90 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC15.35■□□□□ 0.05
NEUROD4Q9HD90 PDPK2P-202ENST00000562415 1191 ntBASIC15.35■□□□□ 0.05
NEUROD4Q9HD90 AP001160.2-201ENST00000596071 487 ntBASIC15.35■□□□□ 0.05
NEUROD4Q9HD90 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC15.35■□□□□ 0.05
NEUROD4Q9HD90 HOTTIP_1.1-201ENST00000620415 57 ntBASIC15.35■□□□□ 0.05
NEUROD4Q9HD90 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
NEUROD4Q9HD90 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
NEUROD4Q9HD90 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC15.35■□□□□ 0.05
NEUROD4Q9HD90 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC15.35■□□□□ 0.05
NEUROD4Q9HD90 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC15.35■□□□□ 0.05
NEUROD4Q9HD90 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC15.35■□□□□ 0.05
NEUROD4Q9HD90 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC15.35■□□□□ 0.05
NEUROD4Q9HD90 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
NEUROD4Q9HD90 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
NEUROD4Q9HD90 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
NEUROD4Q9HD90 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
NEUROD4Q9HD90 CICP6-201ENST00000457191 2729 ntBASIC15.35■□□□□ 0.05
NEUROD4Q9HD90 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
NEUROD4Q9HD90 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
NEUROD4Q9HD90 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
NEUROD4Q9HD90 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
NEUROD4Q9HD90 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC15.35■□□□□ 0.05
NEUROD4Q9HD90 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
NEUROD4Q9HD90 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC15.35■□□□□ 0.05
NEUROD4Q9HD90 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC15.35■□□□□ 0.05
NEUROD4Q9HD90 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC15.35■□□□□ 0.05
NEUROD4Q9HD90 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
NEUROD4Q9HD90 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
NEUROD4Q9HD90 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC15.34■□□□□ 0.05
NEUROD4Q9HD90 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
NEUROD4Q9HD90 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC15.34■□□□□ 0.05
NEUROD4Q9HD90 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
NEUROD4Q9HD90 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
NEUROD4Q9HD90 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
NEUROD4Q9HD90 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
NEUROD4Q9HD90 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC15.34■□□□□ 0.05
NEUROD4Q9HD90 AC002056.1-201ENST00000395613 760 ntBASIC15.34■□□□□ 0.05
NEUROD4Q9HD90 HAUS4P1-201ENST00000406739 1145 ntBASIC15.34■□□□□ 0.05
NEUROD4Q9HD90 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC15.34■□□□□ 0.05
NEUROD4Q9HD90 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
NEUROD4Q9HD90 AC040169.1-201ENST00000565382 521 ntBASIC15.34■□□□□ 0.05
NEUROD4Q9HD90 AC018845.2-201ENST00000568326 409 ntBASIC15.34■□□□□ 0.05
NEUROD4Q9HD90 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC15.34■□□□□ 0.05
NEUROD4Q9HD90 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC15.34■□□□□ 0.05
NEUROD4Q9HD90 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC15.34■□□□□ 0.05
NEUROD4Q9HD90 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
NEUROD4Q9HD90 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
NEUROD4Q9HD90 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
NEUROD4Q9HD90 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
NEUROD4Q9HD90 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
NEUROD4Q9HD90 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
NEUROD4Q9HD90 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
NEUROD4Q9HD90 PAUPAR-201ENST00000630360 2965 ntBASIC15.34■□□□□ 0.05
NEUROD4Q9HD90 REM2-202ENST00000536884 1331 ntTSL 2 BASIC15.34■□□□□ 0.05
NEUROD4Q9HD90 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC15.34■□□□□ 0.05
NEUROD4Q9HD90 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC15.34■□□□□ 0.05
NEUROD4Q9HD90 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
NEUROD4Q9HD90 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
NEUROD4Q9HD90 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC15.34■□□□□ 0.05
NEUROD4Q9HD90 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
NEUROD4Q9HD90 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
NEUROD4Q9HD90 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms