Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
LRRC40Q9H9A6 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LRRC40Q9H9A6 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
LRRC40Q9H9A6 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
LRRC40Q9H9A6 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
LRRC40Q9H9A6 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LRRC40Q9H9A6 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
LRRC40Q9H9A6 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LRRC40Q9H9A6 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
LRRC40Q9H9A6 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
LRRC40Q9H9A6 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
LRRC40Q9H9A6 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
LRRC40Q9H9A6 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
LRRC40Q9H9A6 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
LRRC40Q9H9A6 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LRRC40Q9H9A6 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LRRC40Q9H9A6 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LRRC40Q9H9A6 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LRRC40Q9H9A6 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LRRC40Q9H9A6 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC16.49■□□□□ 0.23
LRRC40Q9H9A6 AL355306.1-201ENST00000415580 579 ntBASIC16.49■□□□□ 0.23
LRRC40Q9H9A6 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC16.49■□□□□ 0.23
LRRC40Q9H9A6 VILL-207ENST00000465644 1857 ntTSL 5 BASIC16.49■□□□□ 0.23
LRRC40Q9H9A6 NMU-202ENST00000505262 693 ntTSL 3 BASIC16.49■□□□□ 0.23
LRRC40Q9H9A6 KRT18P58-201ENST00000527480 1120 ntBASIC16.49■□□□□ 0.23
LRRC40Q9H9A6 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC16.49■□□□□ 0.23
LRRC40Q9H9A6 MIR4321-201ENST00000592276 80 ntBASIC16.49■□□□□ 0.23
LRRC40Q9H9A6 AC073389.1-201ENST00000595595 795 ntBASIC16.49■□□□□ 0.23
LRRC40Q9H9A6 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
LRRC40Q9H9A6 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC16.49■□□□□ 0.23
LRRC40Q9H9A6 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
LRRC40Q9H9A6 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC16.49■□□□□ 0.23
LRRC40Q9H9A6 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC16.49■□□□□ 0.23
LRRC40Q9H9A6 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
LRRC40Q9H9A6 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LRRC40Q9H9A6 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
LRRC40Q9H9A6 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LRRC40Q9H9A6 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC16.48■□□□□ 0.23
LRRC40Q9H9A6 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LRRC40Q9H9A6 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LRRC40Q9H9A6 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
LRRC40Q9H9A6 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LRRC40Q9H9A6 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
LRRC40Q9H9A6 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LRRC40Q9H9A6 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
LRRC40Q9H9A6 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LRRC40Q9H9A6 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LRRC40Q9H9A6 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LRRC40Q9H9A6 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
LRRC40Q9H9A6 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LRRC40Q9H9A6 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC16.48■□□□□ 0.23
LRRC40Q9H9A6 MIR940-201ENST00000401276 94 ntBASIC16.48■□□□□ 0.23
LRRC40Q9H9A6 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC16.48■□□□□ 0.23
LRRC40Q9H9A6 AL671277.1-201ENST00000429656 993 ntBASIC16.48■□□□□ 0.23
LRRC40Q9H9A6 FAM58CP-201ENST00000435741 640 ntBASIC16.48■□□□□ 0.23
LRRC40Q9H9A6 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
LRRC40Q9H9A6 AC105233.2-201ENST00000523697 349 ntBASIC16.48■□□□□ 0.23
LRRC40Q9H9A6 FAM86C2P-203ENST00000528684 1004 ntBASIC16.48■□□□□ 0.23
LRRC40Q9H9A6 AF228730.5-201ENST00000530288 346 ntBASIC16.48■□□□□ 0.23
LRRC40Q9H9A6 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC16.48■□□□□ 0.23
LRRC40Q9H9A6 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
LRRC40Q9H9A6 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
LRRC40Q9H9A6 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LRRC40Q9H9A6 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC16.48■□□□□ 0.23
LRRC40Q9H9A6 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC16.48■□□□□ 0.23
LRRC40Q9H9A6 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
LRRC40Q9H9A6 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
LRRC40Q9H9A6 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC16.48■□□□□ 0.23
LRRC40Q9H9A6 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
LRRC40Q9H9A6 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC16.48■□□□□ 0.23
LRRC40Q9H9A6 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
LRRC40Q9H9A6 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC16.48■□□□□ 0.23
LRRC40Q9H9A6 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC16.48■□□□□ 0.23
LRRC40Q9H9A6 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC16.48■□□□□ 0.23
LRRC40Q9H9A6 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LRRC40Q9H9A6 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
LRRC40Q9H9A6 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LRRC40Q9H9A6 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LRRC40Q9H9A6 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
LRRC40Q9H9A6 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LRRC40Q9H9A6 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC16.47■□□□□ 0.23
LRRC40Q9H9A6 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
LRRC40Q9H9A6 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LRRC40Q9H9A6 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC16.47■□□□□ 0.23
LRRC40Q9H9A6 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
LRRC40Q9H9A6 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
LRRC40Q9H9A6 HLA-DQB2-231ENST00000435145 2026 ntBASIC16.47■□□□□ 0.23
LRRC40Q9H9A6 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC16.47■□□□□ 0.23
LRRC40Q9H9A6 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LRRC40Q9H9A6 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
LRRC40Q9H9A6 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
LRRC40Q9H9A6 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LRRC40Q9H9A6 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
LRRC40Q9H9A6 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
LRRC40Q9H9A6 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LRRC40Q9H9A6 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LRRC40Q9H9A6 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC16.47■□□□□ 0.23
LRRC40Q9H9A6 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC16.47■□□□□ 0.23
LRRC40Q9H9A6 AL022342.1-201ENST00000400363 863 ntBASIC16.47■□□□□ 0.23
LRRC40Q9H9A6 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 81.3 ms