Protein–RNA interactions for Protein: Q9H5V8

CDCP1, CUB domain-containing protein 1, humanhuman

Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCP1Q9H5V8 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CDCP1Q9H5V8 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CDCP1Q9H5V8 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC15.18■□□□□ 0.02
CDCP1Q9H5V8 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
CDCP1Q9H5V8 HLA-H-201ENST00000383620 1096 ntBASIC15.18■□□□□ 0.02
CDCP1Q9H5V8 WRB-204ENST00000398753 699 ntTSL 3 BASIC15.18■□□□□ 0.02
CDCP1Q9H5V8 VMO1-203ENST00000416307 712 ntTSL 2 BASIC15.18■□□□□ 0.02
CDCP1Q9H5V8 TREML5P-201ENST00000421694 576 ntBASIC15.18■□□□□ 0.02
CDCP1Q9H5V8 AC055876.3-201ENST00000431496 288 ntBASIC15.18■□□□□ 0.02
CDCP1Q9H5V8 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC15.18■□□□□ 0.02
CDCP1Q9H5V8 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC15.18■□□□□ 0.02
CDCP1Q9H5V8 PPP6R2P1-201ENST00000450880 1275 ntBASIC15.18■□□□□ 0.02
CDCP1Q9H5V8 HLA-J-202ENST00000469281 1241 ntBASIC15.18■□□□□ 0.02
CDCP1Q9H5V8 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC15.18■□□□□ 0.02
CDCP1Q9H5V8 AC098859.1-201ENST00000502915 1238 ntBASIC15.18■□□□□ 0.02
CDCP1Q9H5V8 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC15.18■□□□□ 0.02
CDCP1Q9H5V8 IGHV3-42-201ENST00000520410 361 ntBASIC15.18■□□□□ 0.02
CDCP1Q9H5V8 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC15.18■□□□□ 0.02
CDCP1Q9H5V8 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC15.18■□□□□ 0.02
CDCP1Q9H5V8 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC15.18■□□□□ 0.02
CDCP1Q9H5V8 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC15.18■□□□□ 0.02
CDCP1Q9H5V8 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC15.18■□□□□ 0.02
CDCP1Q9H5V8 AC140878.1-201ENST00000565277 250 ntBASIC15.18■□□□□ 0.02
CDCP1Q9H5V8 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC15.18■□□□□ 0.02
CDCP1Q9H5V8 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC15.18■□□□□ 0.02
CDCP1Q9H5V8 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC15.18■□□□□ 0.02
CDCP1Q9H5V8 AC092364.2-202ENST00000597012 1073 ntBASIC15.18■□□□□ 0.02
CDCP1Q9H5V8 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC15.18■□□□□ 0.02
CDCP1Q9H5V8 AL390955.2-201ENST00000603032 514 ntBASIC15.18■□□□□ 0.02
CDCP1Q9H5V8 AC138649.4-201ENST00000612222 287 ntBASIC15.18■□□□□ 0.02
CDCP1Q9H5V8 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
CDCP1Q9H5V8 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CDCP1Q9H5V8 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC15.18■□□□□ 0.02
CDCP1Q9H5V8 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC15.18■□□□□ 0.02
CDCP1Q9H5V8 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC15.18■□□□□ 0.02
CDCP1Q9H5V8 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CDCP1Q9H5V8 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
CDCP1Q9H5V8 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CDCP1Q9H5V8 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC15.18■□□□□ 0.02
CDCP1Q9H5V8 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
CDCP1Q9H5V8 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CDCP1Q9H5V8 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC15.18■□□□□ 0.02
CDCP1Q9H5V8 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CDCP1Q9H5V8 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC15.18■□□□□ 0.02
CDCP1Q9H5V8 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CDCP1Q9H5V8 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC15.17■□□□□ 0.02
CDCP1Q9H5V8 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC15.17■□□□□ 0.02
CDCP1Q9H5V8 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
CDCP1Q9H5V8 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
CDCP1Q9H5V8 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CDCP1Q9H5V8 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC15.17■□□□□ 0.02
CDCP1Q9H5V8 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
CDCP1Q9H5V8 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
CDCP1Q9H5V8 PAUPAR-201ENST00000630360 2965 ntBASIC15.17■□□□□ 0.02
CDCP1Q9H5V8 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
CDCP1Q9H5V8 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CDCP1Q9H5V8 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CDCP1Q9H5V8 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
CDCP1Q9H5V8 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
CDCP1Q9H5V8 FO538757.1-201ENST00000623083 1397 ntBASIC15.17■□□□□ 0.02
CDCP1Q9H5V8 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CDCP1Q9H5V8 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC15.17■□□□□ 0.02
CDCP1Q9H5V8 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CDCP1Q9H5V8 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
CDCP1Q9H5V8 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC15.17■□□□□ 0.02
CDCP1Q9H5V8 CENPM-205ENST00000404067 905 ntTSL 3 BASIC15.17■□□□□ 0.02
CDCP1Q9H5V8 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC15.17■□□□□ 0.02
CDCP1Q9H5V8 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CDCP1Q9H5V8 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CDCP1Q9H5V8 AC069120.2-201ENST00000524091 540 ntBASIC15.17■□□□□ 0.02
CDCP1Q9H5V8 SPCS2P1-201ENST00000561636 679 ntBASIC15.17■□□□□ 0.02
CDCP1Q9H5V8 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC15.17■□□□□ 0.02
CDCP1Q9H5V8 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC15.17■□□□□ 0.02
CDCP1Q9H5V8 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC15.17■□□□□ 0.02
CDCP1Q9H5V8 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC15.17■□□□□ 0.02
CDCP1Q9H5V8 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CDCP1Q9H5V8 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CDCP1Q9H5V8 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
CDCP1Q9H5V8 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
CDCP1Q9H5V8 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC15.17■□□□□ 0.02
CDCP1Q9H5V8 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CDCP1Q9H5V8 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CDCP1Q9H5V8 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CDCP1Q9H5V8 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
CDCP1Q9H5V8 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CDCP1Q9H5V8 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC15.17■□□□□ 0.02
CDCP1Q9H5V8 GGT4P-201ENST00000623672 1708 ntBASIC15.17■□□□□ 0.02
CDCP1Q9H5V8 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC15.17■□□□□ 0.02
CDCP1Q9H5V8 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
CDCP1Q9H5V8 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CDCP1Q9H5V8 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC15.17■□□□□ 0.02
CDCP1Q9H5V8 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC15.17■□□□□ 0.02
CDCP1Q9H5V8 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC15.17■□□□□ 0.02
CDCP1Q9H5V8 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CDCP1Q9H5V8 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC15.16■□□□□ 0.02
CDCP1Q9H5V8 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC15.16■□□□□ 0.02
CDCP1Q9H5V8 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CDCP1Q9H5V8 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CDCP1Q9H5V8 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC15.16■□□□□ 0.02
CDCP1Q9H5V8 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 67.1 ms