Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 TMEM106C-219ENST00000552546 742 ntTSL 4 BASIC10.33□□□□□ -0.76
KRTAP3-3Q9BYR6 ZCRB1-205ENST00000552673 907 ntTSL 3 BASIC10.33□□□□□ -0.76
KRTAP3-3Q9BYR6 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC10.33□□□□□ -0.76
KRTAP3-3Q9BYR6 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC10.33□□□□□ -0.76
KRTAP3-3Q9BYR6 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC10.33□□□□□ -0.76
KRTAP3-3Q9BYR6 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
KRTAP3-3Q9BYR6 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
KRTAP3-3Q9BYR6 CGA-202ENST00000610310 615 ntTSL 3 BASIC10.33□□□□□ -0.76
KRTAP3-3Q9BYR6 AL136439.1-201ENST00000611364 862 ntTSL 3 BASIC10.33□□□□□ -0.76
KRTAP3-3Q9BYR6 AC008761.3-201ENST00000624803 892 ntBASIC10.33□□□□□ -0.76
KRTAP3-3Q9BYR6 LINC00969-257ENST00000625632 898 ntTSL 5 BASIC10.33□□□□□ -0.76
KRTAP3-3Q9BYR6 LINC01440-208ENST00000627300 699 ntTSL 5 BASIC10.33□□□□□ -0.76
KRTAP3-3Q9BYR6 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC10.33□□□□□ -0.76
KRTAP3-3Q9BYR6 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC10.33□□□□□ -0.76
KRTAP3-3Q9BYR6 MIR3688-2-201ENST00000636963 87 ntBASIC10.33□□□□□ -0.76
KRTAP3-3Q9BYR6 AP002383.4-202ENST00000639030 657 ntTSL 5 BASIC10.33□□□□□ -0.76
KRTAP3-3Q9BYR6 SULT1A4-201ENST00000360423 1390 ntAPPRIS P2 TSL 1 (best) BASIC10.33□□□□□ -0.76
KRTAP3-3Q9BYR6 ADGRF1-202ENST00000371243 1370 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
KRTAP3-3Q9BYR6 NPIPB10P-201ENST00000424293 1354 ntBASIC10.33□□□□□ -0.76
KRTAP3-3Q9BYR6 UCP1-201ENST00000262999 1462 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
KRTAP3-3Q9BYR6 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
KRTAP3-3Q9BYR6 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
KRTAP3-3Q9BYR6 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
KRTAP3-3Q9BYR6 FLG-AS1-201ENST00000382265 1794 ntTSL 5 BASIC10.33□□□□□ -0.76
KRTAP3-3Q9BYR6 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC10.33□□□□□ -0.76
KRTAP3-3Q9BYR6 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC10.33□□□□□ -0.76
KRTAP3-3Q9BYR6 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC10.33□□□□□ -0.76
KRTAP3-3Q9BYR6 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
KRTAP3-3Q9BYR6 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC10.33□□□□□ -0.76
KRTAP3-3Q9BYR6 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
KRTAP3-3Q9BYR6 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC10.33□□□□□ -0.76
KRTAP3-3Q9BYR6 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
KRTAP3-3Q9BYR6 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC10.33□□□□□ -0.76
KRTAP3-3Q9BYR6 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
KRTAP3-3Q9BYR6 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
KRTAP3-3Q9BYR6 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC10.33□□□□□ -0.76
KRTAP3-3Q9BYR6 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
KRTAP3-3Q9BYR6 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC10.33□□□□□ -0.76
KRTAP3-3Q9BYR6 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
KRTAP3-3Q9BYR6 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
KRTAP3-3Q9BYR6 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC10.33□□□□□ -0.76
KRTAP3-3Q9BYR6 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
KRTAP3-3Q9BYR6 CLNK-202ENST00000442825 1539 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
KRTAP3-3Q9BYR6 ZNF397-209ENST00000591206 1516 ntTSL 2 BASIC10.33□□□□□ -0.76
KRTAP3-3Q9BYR6 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
KRTAP3-3Q9BYR6 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC10.32□□□□□ -0.76
KRTAP3-3Q9BYR6 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
KRTAP3-3Q9BYR6 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC10.32□□□□□ -0.76
KRTAP3-3Q9BYR6 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
KRTAP3-3Q9BYR6 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
KRTAP3-3Q9BYR6 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC10.32□□□□□ -0.76
KRTAP3-3Q9BYR6 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
KRTAP3-3Q9BYR6 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC10.32□□□□□ -0.76
KRTAP3-3Q9BYR6 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
KRTAP3-3Q9BYR6 PSMC6-219ENST00000612399 1590 ntAPPRIS P2 TSL 1 (best) BASIC10.32□□□□□ -0.76
KRTAP3-3Q9BYR6 IL19-204ENST00000620365 1586 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
KRTAP3-3Q9BYR6 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
KRTAP3-3Q9BYR6 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
KRTAP3-3Q9BYR6 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
KRTAP3-3Q9BYR6 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC10.32□□□□□ -0.76
KRTAP3-3Q9BYR6 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
KRTAP3-3Q9BYR6 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
KRTAP3-3Q9BYR6 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC10.32□□□□□ -0.76
KRTAP3-3Q9BYR6 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
KRTAP3-3Q9BYR6 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
KRTAP3-3Q9BYR6 OR2T33-201ENST00000318021 1066 ntAPPRIS P1 BASIC10.32□□□□□ -0.76
KRTAP3-3Q9BYR6 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
KRTAP3-3Q9BYR6 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
KRTAP3-3Q9BYR6 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
KRTAP3-3Q9BYR6 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC10.32□□□□□ -0.76
KRTAP3-3Q9BYR6 MUC1-205ENST00000368389 543 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
KRTAP3-3Q9BYR6 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
KRTAP3-3Q9BYR6 RNASE11-201ENST00000398008 872 ntAPPRIS P2 TSL 2 BASIC10.32□□□□□ -0.76
KRTAP3-3Q9BYR6 AL021331.1-201ENST00000402817 582 ntBASIC10.32□□□□□ -0.76
KRTAP3-3Q9BYR6 AL031577.2-201ENST00000404133 280 ntBASIC10.32□□□□□ -0.76
KRTAP3-3Q9BYR6 HNRNPA1P27-201ENST00000412087 955 ntBASIC10.32□□□□□ -0.76
KRTAP3-3Q9BYR6 AP001625.3-201ENST00000416179 449 ntTSL 2 BASIC10.32□□□□□ -0.76
KRTAP3-3Q9BYR6 GTF3C2-AS1-201ENST00000416453 863 ntTSL 2 BASIC10.32□□□□□ -0.76
KRTAP3-3Q9BYR6 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC10.32□□□□□ -0.76
KRTAP3-3Q9BYR6 AP000233.2-202ENST00000418942 684 ntTSL 5 BASIC10.32□□□□□ -0.76
KRTAP3-3Q9BYR6 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
KRTAP3-3Q9BYR6 VN1R35P-201ENST00000428102 693 ntBASIC10.32□□□□□ -0.76
KRTAP3-3Q9BYR6 AL589880.1-201ENST00000448271 287 ntBASIC10.32□□□□□ -0.76
KRTAP3-3Q9BYR6 DNAJC19P1-201ENST00000455312 319 ntBASIC10.32□□□□□ -0.76
KRTAP3-3Q9BYR6 HNRNPA1P26-201ENST00000457695 1092 ntBASIC10.32□□□□□ -0.76
KRTAP3-3Q9BYR6 OR2A1-AS1-204ENST00000470435 602 ntBASIC10.32□□□□□ -0.76
KRTAP3-3Q9BYR6 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC10.32□□□□□ -0.76
KRTAP3-3Q9BYR6 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC10.32□□□□□ -0.76
KRTAP3-3Q9BYR6 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
KRTAP3-3Q9BYR6 LINC02218-201ENST00000503267 529 ntTSL 2 BASIC10.32□□□□□ -0.76
KRTAP3-3Q9BYR6 AC010267.1-201ENST00000508636 553 ntTSL 4 BASIC10.32□□□□□ -0.76
KRTAP3-3Q9BYR6 AC093824.1-201ENST00000508796 343 ntBASIC10.32□□□□□ -0.76
KRTAP3-3Q9BYR6 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC10.32□□□□□ -0.76
KRTAP3-3Q9BYR6 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC10.32□□□□□ -0.76
KRTAP3-3Q9BYR6 RNU6-789P-201ENST00000517105 102 ntBASIC10.32□□□□□ -0.76
KRTAP3-3Q9BYR6 BTF3P1-201ENST00000522014 495 ntBASIC10.32□□□□□ -0.76
KRTAP3-3Q9BYR6 AC023078.3-201ENST00000527463 958 ntBASIC10.32□□□□□ -0.76
KRTAP3-3Q9BYR6 AC027779.1-201ENST00000530492 516 ntTSL 3 BASIC10.32□□□□□ -0.76
KRTAP3-3Q9BYR6 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC10.32□□□□□ -0.76
KRTAP3-3Q9BYR6 TIMM9-205ENST00000555404 430 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Retrieved 100 of 98,524 protein–RNA pairs in 69.2 ms