Protein–RNA interactions for Protein: Q9BU61

NDUFAF3, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFAF3Q9BU61 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC12.65□□□□□ -0.38
NDUFAF3Q9BU61 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC12.65□□□□□ -0.38
NDUFAF3Q9BU61 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
NDUFAF3Q9BU61 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
NDUFAF3Q9BU61 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
NDUFAF3Q9BU61 AC117489.1-201ENST00000625169 3217 ntBASIC12.65□□□□□ -0.38
NDUFAF3Q9BU61 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
NDUFAF3Q9BU61 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
NDUFAF3Q9BU61 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.38
NDUFAF3Q9BU61 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
NDUFAF3Q9BU61 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC12.65□□□□□ -0.38
NDUFAF3Q9BU61 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC12.65□□□□□ -0.39
NDUFAF3Q9BU61 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC12.65□□□□□ -0.39
NDUFAF3Q9BU61 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.39
NDUFAF3Q9BU61 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
NDUFAF3Q9BU61 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
NDUFAF3Q9BU61 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
NDUFAF3Q9BU61 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
NDUFAF3Q9BU61 RHBDF1P1-201ENST00000427504 1941 ntBASIC12.64□□□□□ -0.39
NDUFAF3Q9BU61 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
NDUFAF3Q9BU61 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
NDUFAF3Q9BU61 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
NDUFAF3Q9BU61 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
NDUFAF3Q9BU61 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
NDUFAF3Q9BU61 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
NDUFAF3Q9BU61 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC12.64□□□□□ -0.39
NDUFAF3Q9BU61 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
NDUFAF3Q9BU61 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC12.64□□□□□ -0.39
NDUFAF3Q9BU61 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
NDUFAF3Q9BU61 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
NDUFAF3Q9BU61 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
NDUFAF3Q9BU61 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
NDUFAF3Q9BU61 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
NDUFAF3Q9BU61 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
NDUFAF3Q9BU61 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
NDUFAF3Q9BU61 MIR600HG-201ENST00000449175 5984 ntBASIC12.64□□□□□ -0.39
NDUFAF3Q9BU61 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
NDUFAF3Q9BU61 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
NDUFAF3Q9BU61 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
NDUFAF3Q9BU61 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
NDUFAF3Q9BU61 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
NDUFAF3Q9BU61 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
NDUFAF3Q9BU61 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
NDUFAF3Q9BU61 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
NDUFAF3Q9BU61 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC12.64□□□□□ -0.39
NDUFAF3Q9BU61 AC122714.2-201ENST00000502787 707 ntBASIC12.64□□□□□ -0.39
NDUFAF3Q9BU61 CDV3-207ENST00000508481 661 ntTSL 3 BASIC12.64□□□□□ -0.39
NDUFAF3Q9BU61 AC096582.2-201ENST00000510860 516 ntBASIC12.64□□□□□ -0.39
NDUFAF3Q9BU61 IGHV3-52-201ENST00000519770 353 ntBASIC12.64□□□□□ -0.39
NDUFAF3Q9BU61 BMF-207ENST00000559701 630 ntTSL 3 BASIC12.64□□□□□ -0.39
NDUFAF3Q9BU61 COX5A-204ENST00000567270 579 ntTSL 3 BASIC12.64□□□□□ -0.39
NDUFAF3Q9BU61 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
NDUFAF3Q9BU61 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC12.64□□□□□ -0.39
NDUFAF3Q9BU61 CCNC-219ENST00000627680 896 ntTSL 5 BASIC12.64□□□□□ -0.39
NDUFAF3Q9BU61 DGCR9-201ENST00000609630 2415 ntBASIC12.64□□□□□ -0.39
NDUFAF3Q9BU61 AC005912.2-201ENST00000619492 2400 ntBASIC12.64□□□□□ -0.39
NDUFAF3Q9BU61 C20orf203-202ENST00000608990 5076 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
NDUFAF3Q9BU61 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
NDUFAF3Q9BU61 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC12.64□□□□□ -0.39
NDUFAF3Q9BU61 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
NDUFAF3Q9BU61 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
NDUFAF3Q9BU61 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
NDUFAF3Q9BU61 C1QTNF1-204ENST00000392445 2833 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
NDUFAF3Q9BU61 CICP8-201ENST00000455800 2813 ntBASIC12.64□□□□□ -0.39
NDUFAF3Q9BU61 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC12.64□□□□□ -0.39
NDUFAF3Q9BU61 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
NDUFAF3Q9BU61 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
NDUFAF3Q9BU61 CARD10-203ENST00000406271 3127 ntTSL 2 BASIC12.64□□□□□ -0.39
NDUFAF3Q9BU61 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
NDUFAF3Q9BU61 TRIB2-202ENST00000381465 2778 ntTSL 2 BASIC12.64□□□□□ -0.39
NDUFAF3Q9BU61 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
NDUFAF3Q9BU61 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
NDUFAF3Q9BU61 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
NDUFAF3Q9BU61 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC12.64□□□□□ -0.39
NDUFAF3Q9BU61 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
NDUFAF3Q9BU61 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
NDUFAF3Q9BU61 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
NDUFAF3Q9BU61 AC087386.2-201ENST00000623212 4637 ntBASIC12.63□□□□□ -0.39
NDUFAF3Q9BU61 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
NDUFAF3Q9BU61 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
NDUFAF3Q9BU61 MTF2-202ENST00000370303 1951 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
NDUFAF3Q9BU61 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
NDUFAF3Q9BU61 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
NDUFAF3Q9BU61 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC12.63□□□□□ -0.39
NDUFAF3Q9BU61 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC12.63□□□□□ -0.39
NDUFAF3Q9BU61 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
NDUFAF3Q9BU61 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC12.63□□□□□ -0.39
NDUFAF3Q9BU61 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC12.63□□□□□ -0.39
NDUFAF3Q9BU61 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
NDUFAF3Q9BU61 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
NDUFAF3Q9BU61 SPOCK3-218ENST00000511531 2908 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
NDUFAF3Q9BU61 PC-208ENST00000529047 1607 ntTSL 3 BASIC12.63□□□□□ -0.39
NDUFAF3Q9BU61 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
NDUFAF3Q9BU61 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC12.63□□□□□ -0.39
NDUFAF3Q9BU61 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC12.63□□□□□ -0.39
NDUFAF3Q9BU61 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
NDUFAF3Q9BU61 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
NDUFAF3Q9BU61 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC12.63□□□□□ -0.39
NDUFAF3Q9BU61 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
NDUFAF3Q9BU61 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms