Protein–RNA interactions for Protein: Q9BT23

LIMD2, LIM domain-containing protein 2, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2Q9BT23 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
LIMD2Q9BT23 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
LIMD2Q9BT23 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC9.75□□□□□ -0.85
LIMD2Q9BT23 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
LIMD2Q9BT23 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
LIMD2Q9BT23 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC9.75□□□□□ -0.85
LIMD2Q9BT23 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC9.75□□□□□ -0.85
LIMD2Q9BT23 AC004870.1-201ENST00000315132 882 ntBASIC9.75□□□□□ -0.85
LIMD2Q9BT23 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC9.75□□□□□ -0.85
LIMD2Q9BT23 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC9.75□□□□□ -0.85
LIMD2Q9BT23 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC9.75□□□□□ -0.85
LIMD2Q9BT23 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC9.75□□□□□ -0.85
LIMD2Q9BT23 METTL26-205ENST00000397666 726 ntTSL 2 BASIC9.75□□□□□ -0.85
LIMD2Q9BT23 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC9.75□□□□□ -0.85
LIMD2Q9BT23 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC9.75□□□□□ -0.85
LIMD2Q9BT23 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC9.75□□□□□ -0.85
LIMD2Q9BT23 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC9.75□□□□□ -0.85
LIMD2Q9BT23 NMU-205ENST00000511469 756 ntTSL 3 BASIC9.75□□□□□ -0.85
LIMD2Q9BT23 AC136632.2-201ENST00000512891 861 ntBASIC9.75□□□□□ -0.85
LIMD2Q9BT23 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC9.75□□□□□ -0.85
LIMD2Q9BT23 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
LIMD2Q9BT23 PNMT-203ENST00000581428 677 ntTSL 2 BASIC9.75□□□□□ -0.85
LIMD2Q9BT23 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
LIMD2Q9BT23 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
LIMD2Q9BT23 AC013467.2-201ENST00000605472 835 ntBASIC9.75□□□□□ -0.85
LIMD2Q9BT23 AC005593.1-201ENST00000624894 515 ntBASIC9.75□□□□□ -0.85
LIMD2Q9BT23 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC9.75□□□□□ -0.85
LIMD2Q9BT23 AC107918.4-202ENST00000641623 219 ntBASIC9.75□□□□□ -0.85
LIMD2Q9BT23 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
LIMD2Q9BT23 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC9.75□□□□□ -0.85
LIMD2Q9BT23 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
LIMD2Q9BT23 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC9.75□□□□□ -0.85
LIMD2Q9BT23 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC9.75□□□□□ -0.85
LIMD2Q9BT23 POFUT1-202ENST00000375749 5235 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
LIMD2Q9BT23 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC9.75□□□□□ -0.85
LIMD2Q9BT23 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC9.75□□□□□ -0.85
LIMD2Q9BT23 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
LIMD2Q9BT23 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC9.75□□□□□ -0.85
LIMD2Q9BT23 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC9.75□□□□□ -0.85
LIMD2Q9BT23 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC9.75□□□□□ -0.85
LIMD2Q9BT23 PDGFRB-201ENST00000261799 5717 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
LIMD2Q9BT23 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
LIMD2Q9BT23 BANP-203ENST00000393207 2438 ntTSL 2 BASIC9.75□□□□□ -0.85
LIMD2Q9BT23 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
LIMD2Q9BT23 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC9.75□□□□□ -0.85
LIMD2Q9BT23 AC126177.1-201ENST00000547829 2218 ntBASIC9.75□□□□□ -0.85
LIMD2Q9BT23 SLC35E2B-205ENST00000617444 6283 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
LIMD2Q9BT23 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
LIMD2Q9BT23 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
LIMD2Q9BT23 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
LIMD2Q9BT23 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC9.75□□□□□ -0.85
LIMD2Q9BT23 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC9.75□□□□□ -0.85
LIMD2Q9BT23 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC9.75□□□□□ -0.85
LIMD2Q9BT23 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC9.75□□□□□ -0.85
LIMD2Q9BT23 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC9.75□□□□□ -0.85
LIMD2Q9BT23 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
LIMD2Q9BT23 LMBR1-201ENST00000353442 7997 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
LIMD2Q9BT23 ANKHD1-203ENST00000360839 8221 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
LIMD2Q9BT23 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC9.74□□□□□ -0.85
LIMD2Q9BT23 PTPRS-204ENST00000587303 6353 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
LIMD2Q9BT23 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC9.74□□□□□ -0.85
LIMD2Q9BT23 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
LIMD2Q9BT23 BAHCC1-201ENST00000307745 10342 ntAPPRIS ALT2 TSL 5 BASIC9.74□□□□□ -0.85
LIMD2Q9BT23 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC9.74□□□□□ -0.85
LIMD2Q9BT23 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
LIMD2Q9BT23 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC9.74□□□□□ -0.85
LIMD2Q9BT23 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
LIMD2Q9BT23 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC9.74□□□□□ -0.85
LIMD2Q9BT23 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC9.74□□□□□ -0.85
LIMD2Q9BT23 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC9.74□□□□□ -0.85
LIMD2Q9BT23 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
LIMD2Q9BT23 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
LIMD2Q9BT23 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
LIMD2Q9BT23 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
LIMD2Q9BT23 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC9.74□□□□□ -0.85
LIMD2Q9BT23 ZNF275-201ENST00000370249 5920 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
LIMD2Q9BT23 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
LIMD2Q9BT23 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
LIMD2Q9BT23 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC9.74□□□□□ -0.85
LIMD2Q9BT23 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
LIMD2Q9BT23 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC9.74□□□□□ -0.85
LIMD2Q9BT23 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC9.74□□□□□ -0.85
LIMD2Q9BT23 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC9.74□□□□□ -0.85
LIMD2Q9BT23 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
LIMD2Q9BT23 AL137784.3-201ENST00000623858 2288 ntBASIC9.74□□□□□ -0.85
LIMD2Q9BT23 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC9.74□□□□□ -0.85
LIMD2Q9BT23 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC9.74□□□□□ -0.85
LIMD2Q9BT23 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
LIMD2Q9BT23 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC9.74□□□□□ -0.85
LIMD2Q9BT23 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
LIMD2Q9BT23 WDR53-204ENST00000433160 887 ntTSL 5 BASIC9.74□□□□□ -0.85
LIMD2Q9BT23 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC9.74□□□□□ -0.85
LIMD2Q9BT23 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
LIMD2Q9BT23 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC9.74□□□□□ -0.85
LIMD2Q9BT23 AC093909.1-201ENST00000504731 1122 ntBASIC9.74□□□□□ -0.85
LIMD2Q9BT23 TOLLIP-AS1-201ENST00000530897 939 ntBASIC9.74□□□□□ -0.85
LIMD2Q9BT23 SART3-203ENST00000546611 1184 ntBASIC9.74□□□□□ -0.85
LIMD2Q9BT23 AC005412.3-201ENST00000580309 715 ntBASIC9.74□□□□□ -0.85
LIMD2Q9BT23 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC9.74□□□□□ -0.85
LIMD2Q9BT23 CLEC4GP1-201ENST00000596555 870 ntBASIC9.74□□□□□ -0.85
Retrieved 100 of 98,524 protein–RNA pairs in 66 ms