Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC14.87□□□□□ -0.03
SNX18Q96RF0 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC14.87□□□□□ -0.03
SNX18Q96RF0 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SNX18Q96RF0 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC14.87□□□□□ -0.03
SNX18Q96RF0 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SNX18Q96RF0 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
SNX18Q96RF0 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC14.87□□□□□ -0.03
SNX18Q96RF0 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SNX18Q96RF0 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
SNX18Q96RF0 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SNX18Q96RF0 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC14.86□□□□□ -0.03
SNX18Q96RF0 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SNX18Q96RF0 AC013268.4-201ENST00000637413 2228 ntBASIC14.86□□□□□ -0.03
SNX18Q96RF0 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SNX18Q96RF0 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SNX18Q96RF0 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SNX18Q96RF0 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
SNX18Q96RF0 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SNX18Q96RF0 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
SNX18Q96RF0 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC14.86□□□□□ -0.03
SNX18Q96RF0 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC14.86□□□□□ -0.03
SNX18Q96RF0 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC14.86□□□□□ -0.03
SNX18Q96RF0 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SNX18Q96RF0 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC14.86□□□□□ -0.03
SNX18Q96RF0 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SNX18Q96RF0 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SNX18Q96RF0 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC14.86□□□□□ -0.03
SNX18Q96RF0 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SNX18Q96RF0 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
SNX18Q96RF0 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC14.86□□□□□ -0.03
SNX18Q96RF0 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
SNX18Q96RF0 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SNX18Q96RF0 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SNX18Q96RF0 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
SNX18Q96RF0 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SNX18Q96RF0 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC14.86□□□□□ -0.03
SNX18Q96RF0 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SNX18Q96RF0 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC14.86□□□□□ -0.03
SNX18Q96RF0 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC14.86□□□□□ -0.03
SNX18Q96RF0 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SNX18Q96RF0 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SNX18Q96RF0 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC14.86□□□□□ -0.03
SNX18Q96RF0 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC14.86□□□□□ -0.03
SNX18Q96RF0 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SNX18Q96RF0 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC14.86□□□□□ -0.03
SNX18Q96RF0 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SNX18Q96RF0 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SNX18Q96RF0 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SNX18Q96RF0 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC14.86□□□□□ -0.03
SNX18Q96RF0 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SNX18Q96RF0 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
SNX18Q96RF0 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC14.85□□□□□ -0.03
SNX18Q96RF0 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SNX18Q96RF0 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SNX18Q96RF0 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SNX18Q96RF0 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SNX18Q96RF0 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
SNX18Q96RF0 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SNX18Q96RF0 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
SNX18Q96RF0 AC026748.1-201ENST00000624349 3251 ntBASIC14.85□□□□□ -0.03
SNX18Q96RF0 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
SNX18Q96RF0 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
SNX18Q96RF0 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SNX18Q96RF0 PCGF3-213ENST00000620529 1899 ntBASIC14.85□□□□□ -0.03
SNX18Q96RF0 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SNX18Q96RF0 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC14.85□□□□□ -0.03
SNX18Q96RF0 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SNX18Q96RF0 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SNX18Q96RF0 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SNX18Q96RF0 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC14.85□□□□□ -0.03
SNX18Q96RF0 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC14.85□□□□□ -0.03
SNX18Q96RF0 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SNX18Q96RF0 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SNX18Q96RF0 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
SNX18Q96RF0 CDK2AP2P3-201ENST00000422476 372 ntBASIC14.85□□□□□ -0.03
SNX18Q96RF0 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC14.85□□□□□ -0.03
SNX18Q96RF0 RPL13AP23-201ENST00000480739 586 ntBASIC14.85□□□□□ -0.03
SNX18Q96RF0 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC14.85□□□□□ -0.03
SNX18Q96RF0 KRT18P58-201ENST00000527480 1120 ntBASIC14.85□□□□□ -0.03
SNX18Q96RF0 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC14.85□□□□□ -0.03
SNX18Q96RF0 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC14.85□□□□□ -0.03
SNX18Q96RF0 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SNX18Q96RF0 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC14.85□□□□□ -0.03
SNX18Q96RF0 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
SNX18Q96RF0 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SNX18Q96RF0 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SNX18Q96RF0 AC010654.1-201ENST00000615722 808 ntBASIC14.85□□□□□ -0.03
SNX18Q96RF0 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC14.85□□□□□ -0.03
SNX18Q96RF0 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SNX18Q96RF0 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SNX18Q96RF0 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC14.85□□□□□ -0.03
SNX18Q96RF0 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SNX18Q96RF0 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
SNX18Q96RF0 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SNX18Q96RF0 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC14.85□□□□□ -0.03
SNX18Q96RF0 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
SNX18Q96RF0 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
SNX18Q96RF0 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SNX18Q96RF0 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SNX18Q96RF0 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms