Protein–RNA interactions for Protein: Q96PY6

NEK1, Serine/threonine-protein kinase Nek1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1Q96PY6 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
NEK1Q96PY6 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC19.19■□□□□ 0.66
NEK1Q96PY6 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC19.19■□□□□ 0.66
NEK1Q96PY6 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NEK1Q96PY6 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
NEK1Q96PY6 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
NEK1Q96PY6 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NEK1Q96PY6 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC19.19■□□□□ 0.66
NEK1Q96PY6 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC19.19■□□□□ 0.66
NEK1Q96PY6 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
NEK1Q96PY6 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC19.19■□□□□ 0.66
NEK1Q96PY6 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NEK1Q96PY6 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NEK1Q96PY6 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
NEK1Q96PY6 FAM220BP-201ENST00000377689 816 ntBASIC19.19■□□□□ 0.66
NEK1Q96PY6 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
NEK1Q96PY6 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC19.19■□□□□ 0.66
NEK1Q96PY6 COA5-202ENST00000409997 557 ntTSL 4 BASIC19.19■□□□□ 0.66
NEK1Q96PY6 UPF3AP3-201ENST00000420996 769 ntBASIC19.19■□□□□ 0.66
NEK1Q96PY6 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
NEK1Q96PY6 SLC25A39P2-201ENST00000537614 270 ntBASIC19.19■□□□□ 0.66
NEK1Q96PY6 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
NEK1Q96PY6 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC19.19■□□□□ 0.66
NEK1Q96PY6 MIR3687-2-201ENST00000577708 61 ntBASIC19.19■□□□□ 0.66
NEK1Q96PY6 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
NEK1Q96PY6 MIR3687-1-201ENST00000614492 61 ntBASIC19.19■□□□□ 0.66
NEK1Q96PY6 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC19.19■□□□□ 0.66
NEK1Q96PY6 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC19.19■□□□□ 0.66
NEK1Q96PY6 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
NEK1Q96PY6 CICP6-201ENST00000457191 2729 ntBASIC19.19■□□□□ 0.66
NEK1Q96PY6 AP005117.1-202ENST00000581724 1908 ntBASIC19.19■□□□□ 0.66
NEK1Q96PY6 UXT-AS1-201ENST00000590504 1525 ntBASIC19.19■□□□□ 0.66
NEK1Q96PY6 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC19.19■□□□□ 0.66
NEK1Q96PY6 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC19.19■□□□□ 0.66
NEK1Q96PY6 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC19.19■□□□□ 0.66
NEK1Q96PY6 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NEK1Q96PY6 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
NEK1Q96PY6 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC19.19■□□□□ 0.66
NEK1Q96PY6 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NEK1Q96PY6 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
NEK1Q96PY6 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
NEK1Q96PY6 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC19.18■□□□□ 0.66
NEK1Q96PY6 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NEK1Q96PY6 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC19.18■□□□□ 0.66
NEK1Q96PY6 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC19.18■□□□□ 0.66
NEK1Q96PY6 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
NEK1Q96PY6 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC19.18■□□□□ 0.66
NEK1Q96PY6 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NEK1Q96PY6 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
NEK1Q96PY6 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NEK1Q96PY6 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC19.18■□□□□ 0.66
NEK1Q96PY6 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NEK1Q96PY6 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NEK1Q96PY6 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
NEK1Q96PY6 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NEK1Q96PY6 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC19.18■□□□□ 0.66
NEK1Q96PY6 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
NEK1Q96PY6 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
NEK1Q96PY6 RNA5SP410-201ENST00000516285 106 ntBASIC19.18■□□□□ 0.66
NEK1Q96PY6 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC19.18■□□□□ 0.66
NEK1Q96PY6 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC19.18■□□□□ 0.66
NEK1Q96PY6 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC19.18■□□□□ 0.66
NEK1Q96PY6 AL513210.1-201ENST00000629608 234 ntBASIC19.18■□□□□ 0.66
NEK1Q96PY6 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NEK1Q96PY6 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC19.18■□□□□ 0.66
NEK1Q96PY6 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC19.18■□□□□ 0.66
NEK1Q96PY6 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NEK1Q96PY6 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
NEK1Q96PY6 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
NEK1Q96PY6 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC19.18■□□□□ 0.66
NEK1Q96PY6 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC19.18■□□□□ 0.66
NEK1Q96PY6 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
NEK1Q96PY6 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
NEK1Q96PY6 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
NEK1Q96PY6 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
NEK1Q96PY6 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
NEK1Q96PY6 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
NEK1Q96PY6 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC19.17■□□□□ 0.66
NEK1Q96PY6 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC19.17■□□□□ 0.66
NEK1Q96PY6 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
NEK1Q96PY6 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
NEK1Q96PY6 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC19.17■□□□□ 0.66
NEK1Q96PY6 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
NEK1Q96PY6 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC19.17■□□□□ 0.66
NEK1Q96PY6 STOM-202ENST00000347359 870 ntTSL 2 BASIC19.17■□□□□ 0.66
NEK1Q96PY6 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
NEK1Q96PY6 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC19.17■□□□□ 0.66
NEK1Q96PY6 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC19.17■□□□□ 0.66
NEK1Q96PY6 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC19.17■□□□□ 0.66
NEK1Q96PY6 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC19.17■□□□□ 0.66
NEK1Q96PY6 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC19.17■□□□□ 0.66
NEK1Q96PY6 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC19.17■□□□□ 0.66
NEK1Q96PY6 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
NEK1Q96PY6 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
NEK1Q96PY6 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
NEK1Q96PY6 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
NEK1Q96PY6 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
NEK1Q96PY6 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC19.16■□□□□ 0.66
NEK1Q96PY6 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
NEK1Q96PY6 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC19.16■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms