Protein–RNA interactions for Protein: Q96JS3

PGBD1, PiggyBac transposable element-derived protein 1, humanhuman

Predictions only

Length 809 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD1Q96JS3 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PGBD1Q96JS3 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
PGBD1Q96JS3 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC18.85■□□□□ 0.61
PGBD1Q96JS3 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
PGBD1Q96JS3 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
PGBD1Q96JS3 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
PGBD1Q96JS3 KRT18P28-201ENST00000453838 1332 ntBASIC18.85■□□□□ 0.61
PGBD1Q96JS3 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
PGBD1Q96JS3 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PGBD1Q96JS3 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC18.85■□□□□ 0.61
PGBD1Q96JS3 KRT18P32-201ENST00000424695 1287 ntBASIC18.85■□□□□ 0.61
PGBD1Q96JS3 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PGBD1Q96JS3 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC18.85■□□□□ 0.61
PGBD1Q96JS3 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC18.85■□□□□ 0.61
PGBD1Q96JS3 AC109322.1-201ENST00000524499 1264 ntBASIC18.85■□□□□ 0.61
PGBD1Q96JS3 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC18.85■□□□□ 0.61
PGBD1Q96JS3 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
PGBD1Q96JS3 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
PGBD1Q96JS3 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PGBD1Q96JS3 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PGBD1Q96JS3 MYB-201ENST00000316528 3571 ntTSL 5 BASIC18.85■□□□□ 0.61
PGBD1Q96JS3 MYB-241ENST00000616088 3573 ntTSL 5 BASIC18.85■□□□□ 0.61
PGBD1Q96JS3 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
PGBD1Q96JS3 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
PGBD1Q96JS3 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PGBD1Q96JS3 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
PGBD1Q96JS3 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PGBD1Q96JS3 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PGBD1Q96JS3 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PGBD1Q96JS3 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
PGBD1Q96JS3 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PGBD1Q96JS3 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
PGBD1Q96JS3 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC18.84■□□□□ 0.61
PGBD1Q96JS3 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PGBD1Q96JS3 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
PGBD1Q96JS3 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC18.84■□□□□ 0.61
PGBD1Q96JS3 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
PGBD1Q96JS3 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
PGBD1Q96JS3 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PGBD1Q96JS3 AC144831.1-201ENST00000573312 2656 ntBASIC18.84■□□□□ 0.61
PGBD1Q96JS3 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
PGBD1Q96JS3 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PGBD1Q96JS3 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
PGBD1Q96JS3 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PGBD1Q96JS3 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PGBD1Q96JS3 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC18.84■□□□□ 0.61
PGBD1Q96JS3 TSEN15P1-201ENST00000423257 515 ntBASIC18.84■□□□□ 0.61
PGBD1Q96JS3 GPS2P2-201ENST00000430745 888 ntBASIC18.84■□□□□ 0.61
PGBD1Q96JS3 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PGBD1Q96JS3 AP000842.3-202ENST00000569238 1080 ntBASIC18.84■□□□□ 0.61
PGBD1Q96JS3 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC18.84■□□□□ 0.61
PGBD1Q96JS3 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC18.84■□□□□ 0.61
PGBD1Q96JS3 AC093028.1-201ENST00000622998 982 ntBASIC18.84■□□□□ 0.61
PGBD1Q96JS3 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PGBD1Q96JS3 AC008267.7-201ENST00000624570 1194 ntBASIC18.84■□□□□ 0.61
PGBD1Q96JS3 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
PGBD1Q96JS3 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PGBD1Q96JS3 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
PGBD1Q96JS3 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC18.84■□□□□ 0.61
PGBD1Q96JS3 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
PGBD1Q96JS3 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PGBD1Q96JS3 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
PGBD1Q96JS3 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC18.84■□□□□ 0.61
PGBD1Q96JS3 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC18.84■□□□□ 0.61
PGBD1Q96JS3 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC18.84■□□□□ 0.61
PGBD1Q96JS3 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC18.84■□□□□ 0.61
PGBD1Q96JS3 ACE-203ENST00000413513 2237 ntTSL 2 BASIC18.84■□□□□ 0.61
PGBD1Q96JS3 AC126177.1-201ENST00000547829 2218 ntBASIC18.84■□□□□ 0.61
PGBD1Q96JS3 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
PGBD1Q96JS3 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
PGBD1Q96JS3 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC18.83■□□□□ 0.61
PGBD1Q96JS3 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
PGBD1Q96JS3 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
PGBD1Q96JS3 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.61
PGBD1Q96JS3 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
PGBD1Q96JS3 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC18.83■□□□□ 0.61
PGBD1Q96JS3 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
PGBD1Q96JS3 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
PGBD1Q96JS3 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
PGBD1Q96JS3 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.61
PGBD1Q96JS3 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
PGBD1Q96JS3 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
PGBD1Q96JS3 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC18.83■□□□□ 0.6
PGBD1Q96JS3 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
PGBD1Q96JS3 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
PGBD1Q96JS3 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PGBD1Q96JS3 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC18.83■□□□□ 0.6
PGBD1Q96JS3 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC18.83■□□□□ 0.6
PGBD1Q96JS3 PRYP6-201ENST00000514804 343 ntBASIC18.83■□□□□ 0.6
PGBD1Q96JS3 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC18.83■□□□□ 0.6
PGBD1Q96JS3 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
PGBD1Q96JS3 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
PGBD1Q96JS3 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC18.83■□□□□ 0.6
PGBD1Q96JS3 SSH2-211ENST00000590153 570 ntTSL 4 BASIC18.83■□□□□ 0.6
PGBD1Q96JS3 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC18.83■□□□□ 0.6
PGBD1Q96JS3 NKG7-205ENST00000600427 520 ntTSL 3 BASIC18.83■□□□□ 0.6
PGBD1Q96JS3 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC18.83■□□□□ 0.6
PGBD1Q96JS3 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
PGBD1Q96JS3 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
PGBD1Q96JS3 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC18.83■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms