Protein–RNA interactions for Protein: Q96CX6

LRRC58, Leucine-rich repeat-containing protein 58, humanhuman

Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC58Q96CX6 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC15.48■□□□□ 0.07
LRRC58Q96CX6 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC15.48■□□□□ 0.07
LRRC58Q96CX6 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
LRRC58Q96CX6 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
LRRC58Q96CX6 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
LRRC58Q96CX6 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
LRRC58Q96CX6 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC15.47■□□□□ 0.07
LRRC58Q96CX6 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC15.47■□□□□ 0.07
LRRC58Q96CX6 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
LRRC58Q96CX6 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC15.47■□□□□ 0.07
LRRC58Q96CX6 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
LRRC58Q96CX6 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
LRRC58Q96CX6 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
LRRC58Q96CX6 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC15.47■□□□□ 0.07
LRRC58Q96CX6 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
LRRC58Q96CX6 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
LRRC58Q96CX6 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
LRRC58Q96CX6 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC15.47■□□□□ 0.07
LRRC58Q96CX6 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
LRRC58Q96CX6 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
LRRC58Q96CX6 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
LRRC58Q96CX6 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
LRRC58Q96CX6 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
LRRC58Q96CX6 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC15.47■□□□□ 0.07
LRRC58Q96CX6 DUSP5P1-201ENST00000441325 1139 ntBASIC15.47■□□□□ 0.07
LRRC58Q96CX6 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
LRRC58Q96CX6 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC15.47■□□□□ 0.07
LRRC58Q96CX6 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
LRRC58Q96CX6 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
LRRC58Q96CX6 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
LRRC58Q96CX6 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC15.47■□□□□ 0.07
LRRC58Q96CX6 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC15.47■□□□□ 0.07
LRRC58Q96CX6 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC15.47■□□□□ 0.07
LRRC58Q96CX6 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC15.47■□□□□ 0.07
LRRC58Q96CX6 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
LRRC58Q96CX6 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC15.47■□□□□ 0.07
LRRC58Q96CX6 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC15.47■□□□□ 0.07
LRRC58Q96CX6 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC15.47■□□□□ 0.07
LRRC58Q96CX6 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
LRRC58Q96CX6 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
LRRC58Q96CX6 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC15.47■□□□□ 0.07
LRRC58Q96CX6 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC15.47■□□□□ 0.07
LRRC58Q96CX6 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
LRRC58Q96CX6 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC15.47■□□□□ 0.07
LRRC58Q96CX6 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC15.47■□□□□ 0.07
LRRC58Q96CX6 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
LRRC58Q96CX6 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
LRRC58Q96CX6 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC15.47■□□□□ 0.07
LRRC58Q96CX6 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
LRRC58Q96CX6 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
LRRC58Q96CX6 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
LRRC58Q96CX6 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC15.47■□□□□ 0.07
LRRC58Q96CX6 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
LRRC58Q96CX6 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC15.47■□□□□ 0.07
LRRC58Q96CX6 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
LRRC58Q96CX6 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC15.47■□□□□ 0.07
LRRC58Q96CX6 FAM45BP-202ENST00000592932 1624 ntBASIC15.46■□□□□ 0.07
LRRC58Q96CX6 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
LRRC58Q96CX6 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
LRRC58Q96CX6 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC15.46■□□□□ 0.07
LRRC58Q96CX6 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC15.46■□□□□ 0.07
LRRC58Q96CX6 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
LRRC58Q96CX6 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC15.46■□□□□ 0.07
LRRC58Q96CX6 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
LRRC58Q96CX6 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
LRRC58Q96CX6 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC15.46■□□□□ 0.07
LRRC58Q96CX6 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
LRRC58Q96CX6 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC15.46■□□□□ 0.07
LRRC58Q96CX6 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
LRRC58Q96CX6 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
LRRC58Q96CX6 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
LRRC58Q96CX6 RAB17-203ENST00000409576 466 ntTSL 3 BASIC15.46■□□□□ 0.07
LRRC58Q96CX6 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC15.46■□□□□ 0.07
LRRC58Q96CX6 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC15.46■□□□□ 0.07
LRRC58Q96CX6 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC15.46■□□□□ 0.07
LRRC58Q96CX6 AC021087.4-201ENST00000563761 564 ntBASIC15.46■□□□□ 0.07
LRRC58Q96CX6 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC15.46■□□□□ 0.07
LRRC58Q96CX6 AC021097.1-201ENST00000607902 574 ntBASIC15.46■□□□□ 0.07
LRRC58Q96CX6 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC15.46■□□□□ 0.07
LRRC58Q96CX6 AC107918.4-202ENST00000641623 219 ntBASIC15.46■□□□□ 0.07
LRRC58Q96CX6 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
LRRC58Q96CX6 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
LRRC58Q96CX6 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
LRRC58Q96CX6 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC15.46■□□□□ 0.07
LRRC58Q96CX6 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC15.46■□□□□ 0.07
LRRC58Q96CX6 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
LRRC58Q96CX6 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC15.46■□□□□ 0.07
LRRC58Q96CX6 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
LRRC58Q96CX6 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC15.46■□□□□ 0.07
LRRC58Q96CX6 TPO-203ENST00000346956 2923 ntTSL 5 BASIC15.46■□□□□ 0.06
LRRC58Q96CX6 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC15.46■□□□□ 0.06
LRRC58Q96CX6 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC15.46■□□□□ 0.06
LRRC58Q96CX6 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
LRRC58Q96CX6 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.06
LRRC58Q96CX6 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC15.46■□□□□ 0.06
LRRC58Q96CX6 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
LRRC58Q96CX6 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
LRRC58Q96CX6 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
LRRC58Q96CX6 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
LRRC58Q96CX6 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms