Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RFT1Q96AA3 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RFT1Q96AA3 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC14.45□□□□□ -0.1
RFT1Q96AA3 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
RFT1Q96AA3 UPK3BP1-201ENST00000428678 509 ntBASIC14.45□□□□□ -0.1
RFT1Q96AA3 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
RFT1Q96AA3 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC14.45□□□□□ -0.1
RFT1Q96AA3 AC106795.1-205ENST00000512851 1056 ntBASIC14.45□□□□□ -0.1
RFT1Q96AA3 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
RFT1Q96AA3 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
RFT1Q96AA3 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
RFT1Q96AA3 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC14.45□□□□□ -0.1
RFT1Q96AA3 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
RFT1Q96AA3 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RFT1Q96AA3 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
RFT1Q96AA3 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RFT1Q96AA3 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC14.45□□□□□ -0.1
RFT1Q96AA3 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC14.45□□□□□ -0.1
RFT1Q96AA3 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC14.45□□□□□ -0.1
RFT1Q96AA3 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC14.45□□□□□ -0.1
RFT1Q96AA3 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC14.45□□□□□ -0.1
RFT1Q96AA3 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RFT1Q96AA3 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RFT1Q96AA3 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC14.45□□□□□ -0.1
RFT1Q96AA3 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RFT1Q96AA3 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RFT1Q96AA3 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
RFT1Q96AA3 HARS-203ENST00000431330 1774 ntTSL 2 BASIC14.45□□□□□ -0.1
RFT1Q96AA3 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC14.45□□□□□ -0.1
RFT1Q96AA3 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC14.45□□□□□ -0.1
RFT1Q96AA3 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RFT1Q96AA3 AC006277.1-201ENST00000624348 1610 ntBASIC14.44□□□□□ -0.1
RFT1Q96AA3 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
RFT1Q96AA3 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
RFT1Q96AA3 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
RFT1Q96AA3 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC14.44□□□□□ -0.1
RFT1Q96AA3 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC14.44□□□□□ -0.1
RFT1Q96AA3 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
RFT1Q96AA3 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC14.44□□□□□ -0.1
RFT1Q96AA3 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RFT1Q96AA3 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
RFT1Q96AA3 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RFT1Q96AA3 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RFT1Q96AA3 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
RFT1Q96AA3 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC14.44□□□□□ -0.1
RFT1Q96AA3 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RFT1Q96AA3 EMD-201ENST00000369835 966 ntTSL 3 BASIC14.44□□□□□ -0.1
RFT1Q96AA3 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RFT1Q96AA3 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC14.44□□□□□ -0.1
RFT1Q96AA3 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC14.44□□□□□ -0.1
RFT1Q96AA3 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC14.44□□□□□ -0.1
RFT1Q96AA3 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RFT1Q96AA3 AL139011.1-202ENST00000642063 584 ntBASIC14.44□□□□□ -0.1
RFT1Q96AA3 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC14.44□□□□□ -0.1
RFT1Q96AA3 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
RFT1Q96AA3 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
RFT1Q96AA3 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
RFT1Q96AA3 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RFT1Q96AA3 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
RFT1Q96AA3 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
RFT1Q96AA3 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC14.44□□□□□ -0.1
RFT1Q96AA3 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
RFT1Q96AA3 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RFT1Q96AA3 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
RFT1Q96AA3 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC14.44□□□□□ -0.1
RFT1Q96AA3 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC14.44□□□□□ -0.1
RFT1Q96AA3 RALGAPA1-201ENST00000307138 7911 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RFT1Q96AA3 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC14.44□□□□□ -0.1
RFT1Q96AA3 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
RFT1Q96AA3 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
RFT1Q96AA3 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RFT1Q96AA3 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
RFT1Q96AA3 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
RFT1Q96AA3 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC14.43□□□□□ -0.1
RFT1Q96AA3 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
RFT1Q96AA3 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC14.43□□□□□ -0.1
RFT1Q96AA3 AL671710.1-201ENST00000610245 2349 ntBASIC14.43□□□□□ -0.1
RFT1Q96AA3 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RFT1Q96AA3 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC14.43□□□□□ -0.1
RFT1Q96AA3 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
RFT1Q96AA3 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RFT1Q96AA3 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
RFT1Q96AA3 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC14.43□□□□□ -0.1
RFT1Q96AA3 CICP13-201ENST00000422015 2789 ntBASIC14.43□□□□□ -0.1
RFT1Q96AA3 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RFT1Q96AA3 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
RFT1Q96AA3 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC14.43□□□□□ -0.1
RFT1Q96AA3 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
RFT1Q96AA3 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
RFT1Q96AA3 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
RFT1Q96AA3 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC14.43□□□□□ -0.1
RFT1Q96AA3 LSM5-204ENST00000409909 740 ntTSL 2 BASIC14.43□□□□□ -0.1
RFT1Q96AA3 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC14.43□□□□□ -0.1
RFT1Q96AA3 HCG4P8-203ENST00000443049 980 ntBASIC14.43□□□□□ -0.1
RFT1Q96AA3 PRYP5-201ENST00000451909 266 ntBASIC14.43□□□□□ -0.1
RFT1Q96AA3 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC14.43□□□□□ -0.1
RFT1Q96AA3 MIR3652-201ENST00000579335 131 ntBASIC14.43□□□□□ -0.1
RFT1Q96AA3 NT5C-211ENST00000582170 653 ntTSL 3 BASIC14.43□□□□□ -0.1
RFT1Q96AA3 AL139424.1-201ENST00000607572 797 ntBASIC14.43□□□□□ -0.1
RFT1Q96AA3 AL139288.1-201ENST00000623748 933 ntBASIC14.43□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms