Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
PTP4A1Q93096 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
PTP4A1Q93096 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
PTP4A1Q93096 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC14.62□□□□□ -0.07
PTP4A1Q93096 AC026396.1-201ENST00000419388 421 ntBASIC14.62□□□□□ -0.07
PTP4A1Q93096 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
PTP4A1Q93096 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC14.62□□□□□ -0.07
PTP4A1Q93096 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
PTP4A1Q93096 MIR7706-201ENST00000613747 67 ntBASIC14.62□□□□□ -0.07
PTP4A1Q93096 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC14.62□□□□□ -0.07
PTP4A1Q93096 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC14.62□□□□□ -0.07
PTP4A1Q93096 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
PTP4A1Q93096 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
PTP4A1Q93096 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
PTP4A1Q93096 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
PTP4A1Q93096 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC14.62□□□□□ -0.07
PTP4A1Q93096 DKFZP434H168-201ENST00000567381 1905 ntBASIC14.62□□□□□ -0.07
PTP4A1Q93096 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
PTP4A1Q93096 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC14.62□□□□□ -0.07
PTP4A1Q93096 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC14.62□□□□□ -0.07
PTP4A1Q93096 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC14.62□□□□□ -0.07
PTP4A1Q93096 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
PTP4A1Q93096 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
PTP4A1Q93096 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
PTP4A1Q93096 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
PTP4A1Q93096 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
PTP4A1Q93096 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
PTP4A1Q93096 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
PTP4A1Q93096 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
PTP4A1Q93096 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
PTP4A1Q93096 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
PTP4A1Q93096 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
PTP4A1Q93096 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
PTP4A1Q93096 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
PTP4A1Q93096 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC14.61□□□□□ -0.07
PTP4A1Q93096 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
PTP4A1Q93096 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
PTP4A1Q93096 AC098831.1-202ENST00000438821 336 ntBASIC14.61□□□□□ -0.07
PTP4A1Q93096 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC14.61□□□□□ -0.07
PTP4A1Q93096 CXCL1P1-201ENST00000502804 216 ntBASIC14.61□□□□□ -0.07
PTP4A1Q93096 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC14.61□□□□□ -0.07
PTP4A1Q93096 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
PTP4A1Q93096 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC14.61□□□□□ -0.07
PTP4A1Q93096 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
PTP4A1Q93096 MIR3909-201ENST00000579518 119 ntBASIC14.61□□□□□ -0.07
PTP4A1Q93096 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC14.61□□□□□ -0.07
PTP4A1Q93096 AC117500.6-201ENST00000624871 588 ntBASIC14.61□□□□□ -0.07
PTP4A1Q93096 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
PTP4A1Q93096 FAM45BP-202ENST00000592932 1624 ntBASIC14.61□□□□□ -0.07
PTP4A1Q93096 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
PTP4A1Q93096 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
PTP4A1Q93096 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
PTP4A1Q93096 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
PTP4A1Q93096 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
PTP4A1Q93096 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
PTP4A1Q93096 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
PTP4A1Q93096 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
PTP4A1Q93096 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC14.61□□□□□ -0.07
PTP4A1Q93096 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC14.61□□□□□ -0.07
PTP4A1Q93096 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
PTP4A1Q93096 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
PTP4A1Q93096 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
PTP4A1Q93096 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
PTP4A1Q93096 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
PTP4A1Q93096 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
PTP4A1Q93096 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC14.6□□□□□ -0.07
PTP4A1Q93096 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC14.6□□□□□ -0.07
PTP4A1Q93096 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
PTP4A1Q93096 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC14.6□□□□□ -0.07
PTP4A1Q93096 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC14.6□□□□□ -0.07
PTP4A1Q93096 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
PTP4A1Q93096 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
PTP4A1Q93096 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
PTP4A1Q93096 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC14.6□□□□□ -0.07
PTP4A1Q93096 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
PTP4A1Q93096 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
PTP4A1Q93096 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
PTP4A1Q93096 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
PTP4A1Q93096 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
PTP4A1Q93096 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC14.6□□□□□ -0.07
PTP4A1Q93096 ATP6V0CP3-201ENST00000417255 467 ntBASIC14.6□□□□□ -0.07
PTP4A1Q93096 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
PTP4A1Q93096 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
PTP4A1Q93096 AC079776.4-201ENST00000511039 504 ntBASIC14.6□□□□□ -0.07
PTP4A1Q93096 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC14.6□□□□□ -0.07
PTP4A1Q93096 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC14.6□□□□□ -0.07
PTP4A1Q93096 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
PTP4A1Q93096 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC14.6□□□□□ -0.07
PTP4A1Q93096 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC14.6□□□□□ -0.07
PTP4A1Q93096 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
PTP4A1Q93096 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
PTP4A1Q93096 AL031055.1-201ENST00000606362 631 ntBASIC14.6□□□□□ -0.07
PTP4A1Q93096 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC14.6□□□□□ -0.07
PTP4A1Q93096 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
PTP4A1Q93096 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
PTP4A1Q93096 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
PTP4A1Q93096 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
PTP4A1Q93096 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC14.6□□□□□ -0.07
PTP4A1Q93096 AC136621.1-201ENST00000624017 2304 ntBASIC14.6□□□□□ -0.07
PTP4A1Q93096 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms