Protein–RNA interactions for Protein: Q8WXF7

ATL1, Atlastin-1, humanhuman

Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATL1Q8WXF7 RELA-227ENST00000615805 2236 ntTSL 5 BASIC15.9■□□□□ 0.14
ATL1Q8WXF7 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
ATL1Q8WXF7 MYB-201ENST00000316528 3571 ntTSL 5 BASIC15.9■□□□□ 0.14
ATL1Q8WXF7 MYB-241ENST00000616088 3573 ntTSL 5 BASIC15.9■□□□□ 0.14
ATL1Q8WXF7 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC15.9■□□□□ 0.14
ATL1Q8WXF7 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
ATL1Q8WXF7 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC15.89■□□□□ 0.14
ATL1Q8WXF7 TCAF2P1-201ENST00000291129 2421 ntBASIC15.89■□□□□ 0.13
ATL1Q8WXF7 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
ATL1Q8WXF7 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC15.89■□□□□ 0.13
ATL1Q8WXF7 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC15.89■□□□□ 0.13
ATL1Q8WXF7 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
ATL1Q8WXF7 AL589702.1-201ENST00000641229 1509 ntBASIC15.89■□□□□ 0.13
ATL1Q8WXF7 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
ATL1Q8WXF7 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
ATL1Q8WXF7 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC15.89■□□□□ 0.13
ATL1Q8WXF7 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC15.89■□□□□ 0.13
ATL1Q8WXF7 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
ATL1Q8WXF7 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC15.89■□□□□ 0.13
ATL1Q8WXF7 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
ATL1Q8WXF7 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC15.89■□□□□ 0.13
ATL1Q8WXF7 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC15.89■□□□□ 0.13
ATL1Q8WXF7 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
ATL1Q8WXF7 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC15.89■□□□□ 0.13
ATL1Q8WXF7 DNAJB3-201ENST00000446806 729 ntBASIC15.89■□□□□ 0.13
ATL1Q8WXF7 AC245100.5-201ENST00000452108 331 ntBASIC15.89■□□□□ 0.13
ATL1Q8WXF7 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
ATL1Q8WXF7 AL135744.1-201ENST00000565098 629 ntBASIC15.89■□□□□ 0.13
ATL1Q8WXF7 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC15.89■□□□□ 0.13
ATL1Q8WXF7 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC15.89■□□□□ 0.13
ATL1Q8WXF7 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC15.89■□□□□ 0.13
ATL1Q8WXF7 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC15.89■□□□□ 0.13
ATL1Q8WXF7 AC073389.1-201ENST00000595595 795 ntBASIC15.89■□□□□ 0.13
ATL1Q8WXF7 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
ATL1Q8WXF7 AC092902.6-201ENST00000641783 218 ntBASIC15.89■□□□□ 0.13
ATL1Q8WXF7 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
ATL1Q8WXF7 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
ATL1Q8WXF7 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
ATL1Q8WXF7 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC15.89■□□□□ 0.13
ATL1Q8WXF7 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
ATL1Q8WXF7 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
ATL1Q8WXF7 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC15.89■□□□□ 0.13
ATL1Q8WXF7 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
ATL1Q8WXF7 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
ATL1Q8WXF7 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
ATL1Q8WXF7 NARF-206ENST00000457415 1668 ntTSL 5 BASIC15.89■□□□□ 0.13
ATL1Q8WXF7 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
ATL1Q8WXF7 TSPY26P-202ENST00000565928 3884 ntBASIC15.89■□□□□ 0.13
ATL1Q8WXF7 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
ATL1Q8WXF7 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
ATL1Q8WXF7 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
ATL1Q8WXF7 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
ATL1Q8WXF7 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
ATL1Q8WXF7 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC15.88■□□□□ 0.13
ATL1Q8WXF7 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
ATL1Q8WXF7 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
ATL1Q8WXF7 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
ATL1Q8WXF7 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
ATL1Q8WXF7 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
ATL1Q8WXF7 C1R-202ENST00000536053 2347 ntTSL 2 BASIC15.88■□□□□ 0.13
ATL1Q8WXF7 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
ATL1Q8WXF7 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC15.88■□□□□ 0.13
ATL1Q8WXF7 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
ATL1Q8WXF7 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
ATL1Q8WXF7 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC15.88■□□□□ 0.13
ATL1Q8WXF7 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
ATL1Q8WXF7 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
ATL1Q8WXF7 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
ATL1Q8WXF7 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC15.88■□□□□ 0.13
ATL1Q8WXF7 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC15.88■□□□□ 0.13
ATL1Q8WXF7 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC15.88■□□□□ 0.13
ATL1Q8WXF7 AC008267.7-201ENST00000624570 1194 ntBASIC15.88■□□□□ 0.13
ATL1Q8WXF7 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC15.88■□□□□ 0.13
ATL1Q8WXF7 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
ATL1Q8WXF7 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
ATL1Q8WXF7 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
ATL1Q8WXF7 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC15.88■□□□□ 0.13
ATL1Q8WXF7 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
ATL1Q8WXF7 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
ATL1Q8WXF7 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
ATL1Q8WXF7 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
ATL1Q8WXF7 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC15.88■□□□□ 0.13
ATL1Q8WXF7 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
ATL1Q8WXF7 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
ATL1Q8WXF7 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC15.88■□□□□ 0.13
ATL1Q8WXF7 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
ATL1Q8WXF7 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
ATL1Q8WXF7 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC15.87■□□□□ 0.13
ATL1Q8WXF7 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC15.87■□□□□ 0.13
ATL1Q8WXF7 AC132872.4-202ENST00000622924 2756 ntBASIC15.87■□□□□ 0.13
ATL1Q8WXF7 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
ATL1Q8WXF7 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
ATL1Q8WXF7 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
ATL1Q8WXF7 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC15.87■□□□□ 0.13
ATL1Q8WXF7 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC15.87■□□□□ 0.13
ATL1Q8WXF7 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
ATL1Q8WXF7 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
ATL1Q8WXF7 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC15.87■□□□□ 0.13
ATL1Q8WXF7 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC15.87■□□□□ 0.13
ATL1Q8WXF7 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms