Protein–RNA interactions for Protein: Q8WWY6

MBD3L1, Methyl-CpG-binding domain protein 3-like 1, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L1Q8WWY6 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
MBD3L1Q8WWY6 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC12.77□□□□□ -0.37
MBD3L1Q8WWY6 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC12.77□□□□□ -0.37
MBD3L1Q8WWY6 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
MBD3L1Q8WWY6 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
MBD3L1Q8WWY6 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
MBD3L1Q8WWY6 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC12.77□□□□□ -0.37
MBD3L1Q8WWY6 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC12.77□□□□□ -0.37
MBD3L1Q8WWY6 SPDYE21P-201ENST00000413323 827 ntBASIC12.77□□□□□ -0.37
MBD3L1Q8WWY6 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC12.77□□□□□ -0.37
MBD3L1Q8WWY6 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC12.77□□□□□ -0.37
MBD3L1Q8WWY6 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC12.77□□□□□ -0.37
MBD3L1Q8WWY6 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC12.77□□□□□ -0.37
MBD3L1Q8WWY6 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC12.77□□□□□ -0.37
MBD3L1Q8WWY6 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC12.77□□□□□ -0.37
MBD3L1Q8WWY6 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC12.77□□□□□ -0.37
MBD3L1Q8WWY6 AL592071.1-201ENST00000611956 408 ntBASIC12.77□□□□□ -0.37
MBD3L1Q8WWY6 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
MBD3L1Q8WWY6 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.37
MBD3L1Q8WWY6 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
MBD3L1Q8WWY6 CCBE1-201ENST00000398179 5979 ntTSL 5 BASIC12.77□□□□□ -0.37
MBD3L1Q8WWY6 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
MBD3L1Q8WWY6 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC12.77□□□□□ -0.37
MBD3L1Q8WWY6 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
MBD3L1Q8WWY6 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
MBD3L1Q8WWY6 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
MBD3L1Q8WWY6 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
MBD3L1Q8WWY6 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC12.77□□□□□ -0.37
MBD3L1Q8WWY6 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
MBD3L1Q8WWY6 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
MBD3L1Q8WWY6 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
MBD3L1Q8WWY6 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
MBD3L1Q8WWY6 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
MBD3L1Q8WWY6 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
MBD3L1Q8WWY6 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
MBD3L1Q8WWY6 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
MBD3L1Q8WWY6 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
MBD3L1Q8WWY6 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
MBD3L1Q8WWY6 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
MBD3L1Q8WWY6 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC12.76□□□□□ -0.37
MBD3L1Q8WWY6 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC12.76□□□□□ -0.37
MBD3L1Q8WWY6 U82695.1-201ENST00000635752 1889 ntBASIC12.76□□□□□ -0.37
MBD3L1Q8WWY6 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
MBD3L1Q8WWY6 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
MBD3L1Q8WWY6 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
MBD3L1Q8WWY6 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
MBD3L1Q8WWY6 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
MBD3L1Q8WWY6 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
MBD3L1Q8WWY6 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC12.76□□□□□ -0.37
MBD3L1Q8WWY6 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
MBD3L1Q8WWY6 CCS-201ENST00000310190 942 ntTSL 5 BASIC12.76□□□□□ -0.37
MBD3L1Q8WWY6 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
MBD3L1Q8WWY6 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
MBD3L1Q8WWY6 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC12.76□□□□□ -0.37
MBD3L1Q8WWY6 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
MBD3L1Q8WWY6 SNX5-210ENST00000481323 562 ntTSL 3 BASIC12.76□□□□□ -0.37
MBD3L1Q8WWY6 COX11P1-201ENST00000489116 835 ntBASIC12.76□□□□□ -0.37
MBD3L1Q8WWY6 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC12.76□□□□□ -0.37
MBD3L1Q8WWY6 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC12.76□□□□□ -0.37
MBD3L1Q8WWY6 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC12.76□□□□□ -0.37
MBD3L1Q8WWY6 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC12.76□□□□□ -0.37
MBD3L1Q8WWY6 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
MBD3L1Q8WWY6 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC12.76□□□□□ -0.37
MBD3L1Q8WWY6 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC12.76□□□□□ -0.37
MBD3L1Q8WWY6 FGF14-AS2-201ENST00000606448 1074 ntBASIC12.76□□□□□ -0.37
MBD3L1Q8WWY6 AL353135.1-201ENST00000606729 504 ntBASIC12.76□□□□□ -0.37
MBD3L1Q8WWY6 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC12.76□□□□□ -0.37
MBD3L1Q8WWY6 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC12.76□□□□□ -0.37
MBD3L1Q8WWY6 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
MBD3L1Q8WWY6 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
MBD3L1Q8WWY6 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC12.76□□□□□ -0.37
MBD3L1Q8WWY6 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC12.76□□□□□ -0.37
MBD3L1Q8WWY6 GID4-202ENST00000376345 1391 ntTSL 3 BASIC12.76□□□□□ -0.37
MBD3L1Q8WWY6 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC12.76□□□□□ -0.37
MBD3L1Q8WWY6 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC12.76□□□□□ -0.37
MBD3L1Q8WWY6 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
MBD3L1Q8WWY6 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC12.76□□□□□ -0.37
MBD3L1Q8WWY6 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC12.76□□□□□ -0.37
MBD3L1Q8WWY6 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC12.76□□□□□ -0.37
MBD3L1Q8WWY6 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
MBD3L1Q8WWY6 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
MBD3L1Q8WWY6 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
MBD3L1Q8WWY6 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
MBD3L1Q8WWY6 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
MBD3L1Q8WWY6 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
MBD3L1Q8WWY6 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
MBD3L1Q8WWY6 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC12.76□□□□□ -0.37
MBD3L1Q8WWY6 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
MBD3L1Q8WWY6 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
MBD3L1Q8WWY6 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
MBD3L1Q8WWY6 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
MBD3L1Q8WWY6 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
MBD3L1Q8WWY6 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
MBD3L1Q8WWY6 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
MBD3L1Q8WWY6 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
MBD3L1Q8WWY6 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
MBD3L1Q8WWY6 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC12.75□□□□□ -0.37
MBD3L1Q8WWY6 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
MBD3L1Q8WWY6 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
MBD3L1Q8WWY6 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms