Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC19.43■□□□□ 0.7
SNED1Q8TER0 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC19.43■□□□□ 0.7
SNED1Q8TER0 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC19.43■□□□□ 0.7
SNED1Q8TER0 AC079316.1-201ENST00000548397 411 ntBASIC19.43■□□□□ 0.7
SNED1Q8TER0 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC19.43■□□□□ 0.7
SNED1Q8TER0 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SNED1Q8TER0 AC009486.1-201ENST00000569860 813 ntBASIC19.43■□□□□ 0.7
SNED1Q8TER0 RN7SL560P-201ENST00000577943 264 ntBASIC19.43■□□□□ 0.7
SNED1Q8TER0 AC010328.2-201ENST00000597698 1111 ntBASIC19.43■□□□□ 0.7
SNED1Q8TER0 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC19.43■□□□□ 0.7
SNED1Q8TER0 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
SNED1Q8TER0 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SNED1Q8TER0 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SNED1Q8TER0 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SNED1Q8TER0 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
SNED1Q8TER0 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SNED1Q8TER0 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SNED1Q8TER0 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SNED1Q8TER0 RERG-209ENST00000546331 1383 ntTSL 2 BASIC19.43■□□□□ 0.7
SNED1Q8TER0 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SNED1Q8TER0 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SNED1Q8TER0 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SNED1Q8TER0 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SNED1Q8TER0 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SNED1Q8TER0 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC19.43■□□□□ 0.7
SNED1Q8TER0 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC19.43■□□□□ 0.7
SNED1Q8TER0 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
SNED1Q8TER0 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SNED1Q8TER0 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SNED1Q8TER0 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC19.42■□□□□ 0.7
SNED1Q8TER0 AC016694.1-201ENST00000434179 700 ntBASIC19.42■□□□□ 0.7
SNED1Q8TER0 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC19.42■□□□□ 0.7
SNED1Q8TER0 RPL13AP25-201ENST00000484130 612 ntBASIC19.42■□□□□ 0.7
SNED1Q8TER0 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SNED1Q8TER0 AP001063.1-201ENST00000568332 529 ntBASIC19.42■□□□□ 0.7
SNED1Q8TER0 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC19.42■□□□□ 0.7
SNED1Q8TER0 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC19.42■□□□□ 0.7
SNED1Q8TER0 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SNED1Q8TER0 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC19.42■□□□□ 0.7
SNED1Q8TER0 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
SNED1Q8TER0 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SNED1Q8TER0 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SNED1Q8TER0 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
SNED1Q8TER0 AC022211.2-201ENST00000585075 2527 ntBASIC19.42■□□□□ 0.7
SNED1Q8TER0 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SNED1Q8TER0 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC19.42■□□□□ 0.7
SNED1Q8TER0 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
SNED1Q8TER0 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SNED1Q8TER0 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SNED1Q8TER0 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
SNED1Q8TER0 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SNED1Q8TER0 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SNED1Q8TER0 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SNED1Q8TER0 BRF1-202ENST00000379932 884 ntTSL 5 BASIC19.42■□□□□ 0.7
SNED1Q8TER0 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC19.42■□□□□ 0.7
SNED1Q8TER0 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SNED1Q8TER0 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC19.42■□□□□ 0.7
SNED1Q8TER0 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SNED1Q8TER0 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
SNED1Q8TER0 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC19.42■□□□□ 0.7
SNED1Q8TER0 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC19.42■□□□□ 0.7
SNED1Q8TER0 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC19.42■□□□□ 0.7
SNED1Q8TER0 HADH-212ENST00000638621 741 ntTSL 5 BASIC19.42■□□□□ 0.7
SNED1Q8TER0 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
SNED1Q8TER0 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC19.42■□□□□ 0.7
SNED1Q8TER0 AC134312.5-201ENST00000568031 1313 ntBASIC19.41■□□□□ 0.7
SNED1Q8TER0 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SNED1Q8TER0 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SNED1Q8TER0 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SNED1Q8TER0 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
SNED1Q8TER0 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC19.41■□□□□ 0.7
SNED1Q8TER0 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SNED1Q8TER0 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
SNED1Q8TER0 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
SNED1Q8TER0 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SNED1Q8TER0 AGER-203ENST00000375065 665 ntTSL 2 BASIC19.41■□□□□ 0.7
SNED1Q8TER0 TEX30-203ENST00000376022 828 ntTSL 2 BASIC19.41■□□□□ 0.7
SNED1Q8TER0 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SNED1Q8TER0 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC19.41■□□□□ 0.7
SNED1Q8TER0 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC19.41■□□□□ 0.7
SNED1Q8TER0 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC19.41■□□□□ 0.7
SNED1Q8TER0 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SNED1Q8TER0 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC19.41■□□□□ 0.7
SNED1Q8TER0 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC19.41■□□□□ 0.7
SNED1Q8TER0 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC19.41■□□□□ 0.7
SNED1Q8TER0 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC19.41■□□□□ 0.7
SNED1Q8TER0 METTL26-214ENST00000614890 801 ntTSL 3 BASIC19.41■□□□□ 0.7
SNED1Q8TER0 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
SNED1Q8TER0 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC19.41■□□□□ 0.7
SNED1Q8TER0 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC19.41■□□□□ 0.7
SNED1Q8TER0 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SNED1Q8TER0 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
SNED1Q8TER0 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
SNED1Q8TER0 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SNED1Q8TER0 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
SNED1Q8TER0 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
SNED1Q8TER0 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SNED1Q8TER0 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SNED1Q8TER0 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SNED1Q8TER0 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms