Protein–RNA interactions for Protein: Q8NHG7

SVIP, Small VCP/p97-interacting protein, humanhuman

Predictions only

Length 77 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SVIPQ8NHG7 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
SVIPQ8NHG7 MKRN2-202ENST00000411987 1436 ntTSL 2 BASIC9.95□□□□□ -0.82
SVIPQ8NHG7 C19orf12-208ENST00000614091 4489 ntAPPRIS P1 TSL 4 BASIC9.95□□□□□ -0.82
SVIPQ8NHG7 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
SVIPQ8NHG7 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC9.95□□□□□ -0.82
SVIPQ8NHG7 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
SVIPQ8NHG7 ZNF169-204ENST00000481550 1696 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
SVIPQ8NHG7 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
SVIPQ8NHG7 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
SVIPQ8NHG7 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
SVIPQ8NHG7 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
SVIPQ8NHG7 CEP68-202ENST00000377990 5847 ntAPPRIS P3 TSL 1 (best) BASIC9.95□□□□□ -0.82
SVIPQ8NHG7 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC9.95□□□□□ -0.82
SVIPQ8NHG7 GNE-203ENST00000447283 2174 ntTSL 5 BASIC9.95□□□□□ -0.82
SVIPQ8NHG7 NACA-201ENST00000356769 2690 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
SVIPQ8NHG7 UROC1-201ENST00000290868 3149 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
SVIPQ8NHG7 ITIH5-201ENST00000397145 3132 ntTSL 2 BASIC9.95□□□□□ -0.82
SVIPQ8NHG7 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
SVIPQ8NHG7 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC9.95□□□□□ -0.82
SVIPQ8NHG7 KREMEN1-202ENST00000400335 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
SVIPQ8NHG7 UNC13B-206ENST00000617908 6432 ntTSL 5 BASIC9.95□□□□□ -0.82
SVIPQ8NHG7 DGCR5-203ENST00000438934 5492 ntTSL 5 BASIC9.94□□□□□ -0.82
SVIPQ8NHG7 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
SVIPQ8NHG7 SGK3-208ENST00000521198 3306 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
SVIPQ8NHG7 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
SVIPQ8NHG7 C14orf159-228ENST00000523771 2976 ntAPPRIS P3 TSL 1 (best) BASIC9.94□□□□□ -0.82
SVIPQ8NHG7 ENO4-205ENST00000622726 2874 ntAPPRIS ALT2 TSL 5 BASIC9.94□□□□□ -0.82
SVIPQ8NHG7 EPB41L1-203ENST00000373941 2652 ntAPPRIS ALT1 TSL 5 BASIC9.94□□□□□ -0.82
SVIPQ8NHG7 SPDYE8P-201ENST00000333385 2281 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
SVIPQ8NHG7 SPDYE11-201ENST00000340073 2281 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
SVIPQ8NHG7 SPDYE9P-203ENST00000575125 2281 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
SVIPQ8NHG7 DENND4C-205ENST00000434457 6718 ntTSL 5 BASIC9.94□□□□□ -0.82
SVIPQ8NHG7 DLEC1-201ENST00000308059 6426 ntAPPRIS P2 TSL 1 (best) BASIC9.94□□□□□ -0.82
SVIPQ8NHG7 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
SVIPQ8NHG7 CYP4F62P-202ENST00000439137 2144 ntTSL 2 BASIC9.94□□□□□ -0.82
SVIPQ8NHG7 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC9.94□□□□□ -0.82
SVIPQ8NHG7 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
SVIPQ8NHG7 SGSM1-206ENST00000610372 5991 ntTSL 5 BASIC9.94□□□□□ -0.82
SVIPQ8NHG7 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC9.94□□□□□ -0.82
SVIPQ8NHG7 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
SVIPQ8NHG7 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC9.94□□□□□ -0.82
SVIPQ8NHG7 PRAMEF25-201ENST00000614839 1863 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
SVIPQ8NHG7 PRAMEF26-201ENST00000624207 1863 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
SVIPQ8NHG7 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
SVIPQ8NHG7 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
SVIPQ8NHG7 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
SVIPQ8NHG7 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC9.94□□□□□ -0.82
SVIPQ8NHG7 ZNF263-202ENST00000538765 1721 ntTSL 2 BASIC9.94□□□□□ -0.82
SVIPQ8NHG7 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC9.94□□□□□ -0.82
SVIPQ8NHG7 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC9.94□□□□□ -0.82
SVIPQ8NHG7 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
SVIPQ8NHG7 PCDHGA12-201ENST00000252085 4747 ntAPPRIS P3 TSL 1 (best) BASIC9.94□□□□□ -0.82
SVIPQ8NHG7 LGR5-201ENST00000266674 4611 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
SVIPQ8NHG7 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
SVIPQ8NHG7 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
SVIPQ8NHG7 AC008659.1-201ENST00000501834 1458 ntTSL 3 BASIC9.94□□□□□ -0.82
SVIPQ8NHG7 CACNA1G-232ENST00000515411 6960 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
SVIPQ8NHG7 PCDHB2-201ENST00000194155 4126 ntAPPRIS P1 BASIC9.94□□□□□ -0.82
SVIPQ8NHG7 RPGRIP1-213ENST00000557771 3870 ntAPPRIS ALT2 TSL 5 BASIC9.94□□□□□ -0.82
SVIPQ8NHG7 KATNBL1P4-201ENST00000503545 918 ntBASIC9.94□□□□□ -0.82
SVIPQ8NHG7 AC008686.1-201ENST00000586894 565 ntTSL 5 BASIC9.94□□□□□ -0.82
SVIPQ8NHG7 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
SVIPQ8NHG7 GTF2IRD2B-203ENST00000472837 3560 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
SVIPQ8NHG7 ERN2-201ENST00000256797 3549 ntAPPRIS P3 TSL 1 (best) BASIC9.94□□□□□ -0.82
SVIPQ8NHG7 ECE2-204ENST00000402825 3445 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
SVIPQ8NHG7 TRIM26-267ENST00000453195 3318 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
SVIPQ8NHG7 POU2AF1-201ENST00000393067 3295 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
SVIPQ8NHG7 RALA-201ENST00000005257 2880 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
SVIPQ8NHG7 NONO-215ENST00000535149 2882 ntTSL 2 BASIC9.94□□□□□ -0.82
SVIPQ8NHG7 FANCC-202ENST00000375305 4504 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
SVIPQ8NHG7 C14orf159-217ENST00000520328 2687 ntTSL 2 BASIC9.94□□□□□ -0.82
SVIPQ8NHG7 ZNF142-205ENST00000449707 5909 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
SVIPQ8NHG7 DDX50-201ENST00000373585 2538 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
SVIPQ8NHG7 SEPT9-205ENST00000427674 3937 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
SVIPQ8NHG7 ME2-206ENST00000638410 2289 ntTSL 5 BASIC9.94□□□□□ -0.82
SVIPQ8NHG7 ME2-210ENST00000639255 2262 ntTSL 5 BASIC9.94□□□□□ -0.82
SVIPQ8NHG7 SDC3-201ENST00000336798 6392 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
SVIPQ8NHG7 DPP3P1-201ENST00000508984 2063 ntBASIC9.94□□□□□ -0.82
SVIPQ8NHG7 AC068896.1-201ENST00000494792 3422 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
SVIPQ8NHG7 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC9.94□□□□□ -0.82
SVIPQ8NHG7 TSN-212ENST00000536142 3328 ntTSL 2 BASIC9.94□□□□□ -0.82
SVIPQ8NHG7 RBM12B-201ENST00000399300 7269 ntAPPRIS P2 TSL 2 BASIC9.94□□□□□ -0.82
SVIPQ8NHG7 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
SVIPQ8NHG7 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC9.94□□□□□ -0.82
SVIPQ8NHG7 SLA-203ENST00000427060 1914 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
SVIPQ8NHG7 DDX6-202ENST00000526070 1936 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
SVIPQ8NHG7 NUMA1-234ENST00000620566 7012 ntAPPRIS ALT2 TSL 5 BASIC9.94□□□□□ -0.82
SVIPQ8NHG7 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC9.93□□□□□ -0.82
SVIPQ8NHG7 TP73-207ENST00000378290 1831 ntTSL 2 BASIC9.93□□□□□ -0.82
SVIPQ8NHG7 ACVR1-201ENST00000263640 3047 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
SVIPQ8NHG7 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC9.93□□□□□ -0.82
SVIPQ8NHG7 SLC18A1-205ENST00000440926 2956 ntAPPRIS P1 TSL 5 BASIC9.93□□□□□ -0.82
SVIPQ8NHG7 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC9.93□□□□□ -0.82
SVIPQ8NHG7 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC9.93□□□□□ -0.82
SVIPQ8NHG7 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC9.93□□□□□ -0.82
SVIPQ8NHG7 AC148477.4-201ENST00000613430 1793 ntBASIC9.93□□□□□ -0.82
SVIPQ8NHG7 C6orf62-202ENST00000378119 4134 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
SVIPQ8NHG7 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC9.93□□□□□ -0.82
SVIPQ8NHG7 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC9.93□□□□□ -0.82
SVIPQ8NHG7 CYP1A1-202ENST00000395048 2608 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Retrieved 100 of 98,524 protein–RNA pairs in 123.9 ms