Protein–RNA interactions for Protein: Q8NFU1

BEST2, Bestrophin-2, humanhuman

Predictions only

Length 509 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST2Q8NFU1 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
BEST2Q8NFU1 AL136982.4-201ENST00000437689 1740 ntBASIC17.39■□□□□ 0.37
BEST2Q8NFU1 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
BEST2Q8NFU1 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
BEST2Q8NFU1 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
BEST2Q8NFU1 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
BEST2Q8NFU1 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC17.39■□□□□ 0.37
BEST2Q8NFU1 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
BEST2Q8NFU1 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
BEST2Q8NFU1 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
BEST2Q8NFU1 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC17.39■□□□□ 0.37
BEST2Q8NFU1 IMPDH1P4-201ENST00000445028 1534 ntBASIC17.39■□□□□ 0.37
BEST2Q8NFU1 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC17.39■□□□□ 0.37
BEST2Q8NFU1 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
BEST2Q8NFU1 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
BEST2Q8NFU1 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC17.39■□□□□ 0.37
BEST2Q8NFU1 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC17.39■□□□□ 0.37
BEST2Q8NFU1 AC002472.2-201ENST00000442739 958 ntBASIC17.39■□□□□ 0.37
BEST2Q8NFU1 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC17.39■□□□□ 0.37
BEST2Q8NFU1 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC17.39■□□□□ 0.37
BEST2Q8NFU1 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC17.39■□□□□ 0.37
BEST2Q8NFU1 AC243562.2-201ENST00000561247 970 ntBASIC17.39■□□□□ 0.37
BEST2Q8NFU1 HFE2-206ENST00000634927 506 ntTSL 4 BASIC17.39■□□□□ 0.37
BEST2Q8NFU1 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
BEST2Q8NFU1 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
BEST2Q8NFU1 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
BEST2Q8NFU1 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
BEST2Q8NFU1 CYP4F24P-201ENST00000586049 1580 ntBASIC17.39■□□□□ 0.37
BEST2Q8NFU1 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
BEST2Q8NFU1 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
BEST2Q8NFU1 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
BEST2Q8NFU1 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC17.39■□□□□ 0.37
BEST2Q8NFU1 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
BEST2Q8NFU1 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
BEST2Q8NFU1 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
BEST2Q8NFU1 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
BEST2Q8NFU1 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC17.38■□□□□ 0.37
BEST2Q8NFU1 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC17.38■□□□□ 0.37
BEST2Q8NFU1 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
BEST2Q8NFU1 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
BEST2Q8NFU1 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
BEST2Q8NFU1 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC17.38■□□□□ 0.37
BEST2Q8NFU1 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
BEST2Q8NFU1 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
BEST2Q8NFU1 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
BEST2Q8NFU1 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
BEST2Q8NFU1 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC17.38■□□□□ 0.37
BEST2Q8NFU1 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
BEST2Q8NFU1 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
BEST2Q8NFU1 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
BEST2Q8NFU1 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC17.38■□□□□ 0.37
BEST2Q8NFU1 RAC2-204ENST00000406508 893 ntTSL 5 BASIC17.38■□□□□ 0.37
BEST2Q8NFU1 CENPM-206ENST00000407253 818 ntTSL 2 BASIC17.38■□□□□ 0.37
BEST2Q8NFU1 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC17.38■□□□□ 0.37
BEST2Q8NFU1 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC17.38■□□□□ 0.37
BEST2Q8NFU1 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC17.38■□□□□ 0.37
BEST2Q8NFU1 TSPY16P-201ENST00000449843 468 ntBASIC17.38■□□□□ 0.37
BEST2Q8NFU1 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC17.38■□□□□ 0.37
BEST2Q8NFU1 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC17.38■□□□□ 0.37
BEST2Q8NFU1 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
BEST2Q8NFU1 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC17.38■□□□□ 0.37
BEST2Q8NFU1 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
BEST2Q8NFU1 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
BEST2Q8NFU1 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC17.38■□□□□ 0.37
BEST2Q8NFU1 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC17.38■□□□□ 0.37
BEST2Q8NFU1 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC17.38■□□□□ 0.37
BEST2Q8NFU1 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
BEST2Q8NFU1 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
BEST2Q8NFU1 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC17.38■□□□□ 0.37
BEST2Q8NFU1 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
BEST2Q8NFU1 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
BEST2Q8NFU1 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
BEST2Q8NFU1 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
BEST2Q8NFU1 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
BEST2Q8NFU1 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
BEST2Q8NFU1 AL691432.1-201ENST00000596308 1422 ntBASIC17.38■□□□□ 0.37
BEST2Q8NFU1 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC17.38■□□□□ 0.37
BEST2Q8NFU1 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
BEST2Q8NFU1 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
BEST2Q8NFU1 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
BEST2Q8NFU1 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
BEST2Q8NFU1 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
BEST2Q8NFU1 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
BEST2Q8NFU1 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC17.37■□□□□ 0.37
BEST2Q8NFU1 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
BEST2Q8NFU1 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
BEST2Q8NFU1 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC17.37■□□□□ 0.37
BEST2Q8NFU1 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC17.37■□□□□ 0.37
BEST2Q8NFU1 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
BEST2Q8NFU1 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC17.37■□□□□ 0.37
BEST2Q8NFU1 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
BEST2Q8NFU1 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
BEST2Q8NFU1 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
BEST2Q8NFU1 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
BEST2Q8NFU1 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
BEST2Q8NFU1 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
BEST2Q8NFU1 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
BEST2Q8NFU1 AC004987.2-201ENST00000395959 1148 ntBASIC17.37■□□□□ 0.37
BEST2Q8NFU1 AC236430.1-201ENST00000402231 743 ntBASIC17.37■□□□□ 0.37
BEST2Q8NFU1 HAUS4P1-201ENST00000406739 1145 ntBASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms