Protein–RNA interactions for Protein: Q8NE35

CPEB3, Cytoplasmic polyadenylation element-binding protein 3, humanhuman

Known RBP Predictions only

Length 698 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB3Q8NE35 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC14.23□□□□□ -0.13
CPEB3Q8NE35 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC14.23□□□□□ -0.13
CPEB3Q8NE35 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC14.23□□□□□ -0.13
CPEB3Q8NE35 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CPEB3Q8NE35 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CPEB3Q8NE35 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
CPEB3Q8NE35 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
CPEB3Q8NE35 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CPEB3Q8NE35 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
CPEB3Q8NE35 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC14.23□□□□□ -0.13
CPEB3Q8NE35 SP100-205ENST00000409824 1802 ntTSL 5 BASIC14.23□□□□□ -0.13
CPEB3Q8NE35 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC14.23□□□□□ -0.13
CPEB3Q8NE35 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
CPEB3Q8NE35 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CPEB3Q8NE35 PGR-209ENST00000617858 2816 ntTSL 5 BASIC14.23□□□□□ -0.13
CPEB3Q8NE35 STOM-202ENST00000347359 870 ntTSL 2 BASIC14.23□□□□□ -0.13
CPEB3Q8NE35 MIR346-201ENST00000362234 95 ntBASIC14.23□□□□□ -0.13
CPEB3Q8NE35 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC14.23□□□□□ -0.13
CPEB3Q8NE35 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CPEB3Q8NE35 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC14.23□□□□□ -0.13
CPEB3Q8NE35 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC14.23□□□□□ -0.13
CPEB3Q8NE35 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
CPEB3Q8NE35 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
CPEB3Q8NE35 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC14.23□□□□□ -0.13
CPEB3Q8NE35 AC069335.1-201ENST00000489972 472 ntBASIC14.23□□□□□ -0.13
CPEB3Q8NE35 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CPEB3Q8NE35 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC14.23□□□□□ -0.13
CPEB3Q8NE35 IGHV3-62-201ENST00000520057 340 ntBASIC14.23□□□□□ -0.13
CPEB3Q8NE35 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC14.23□□□□□ -0.13
CPEB3Q8NE35 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC14.23□□□□□ -0.13
CPEB3Q8NE35 SSH2-211ENST00000590153 570 ntTSL 4 BASIC14.23□□□□□ -0.13
CPEB3Q8NE35 AC006538.3-201ENST00000612495 578 ntBASIC14.23□□□□□ -0.13
CPEB3Q8NE35 AL513210.1-201ENST00000629608 234 ntBASIC14.23□□□□□ -0.13
CPEB3Q8NE35 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
CPEB3Q8NE35 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
CPEB3Q8NE35 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC14.23□□□□□ -0.13
CPEB3Q8NE35 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC14.23□□□□□ -0.13
CPEB3Q8NE35 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CPEB3Q8NE35 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
CPEB3Q8NE35 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CPEB3Q8NE35 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CPEB3Q8NE35 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CPEB3Q8NE35 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CPEB3Q8NE35 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CPEB3Q8NE35 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
CPEB3Q8NE35 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CPEB3Q8NE35 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CPEB3Q8NE35 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CPEB3Q8NE35 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CPEB3Q8NE35 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CPEB3Q8NE35 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CPEB3Q8NE35 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
CPEB3Q8NE35 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC14.22□□□□□ -0.13
CPEB3Q8NE35 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CPEB3Q8NE35 AC026691.1-201ENST00000602502 2017 ntBASIC14.22□□□□□ -0.13
CPEB3Q8NE35 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
CPEB3Q8NE35 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC14.22□□□□□ -0.13
CPEB3Q8NE35 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC14.22□□□□□ -0.13
CPEB3Q8NE35 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CPEB3Q8NE35 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
CPEB3Q8NE35 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
CPEB3Q8NE35 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CPEB3Q8NE35 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CPEB3Q8NE35 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CPEB3Q8NE35 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CPEB3Q8NE35 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
CPEB3Q8NE35 GOLGA2P9-201ENST00000596977 1937 ntBASIC14.22□□□□□ -0.13
CPEB3Q8NE35 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CPEB3Q8NE35 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC14.22□□□□□ -0.13
CPEB3Q8NE35 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CPEB3Q8NE35 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CPEB3Q8NE35 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CPEB3Q8NE35 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC14.22□□□□□ -0.13
CPEB3Q8NE35 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CPEB3Q8NE35 AC004461.1-201ENST00000412461 403 ntBASIC14.22□□□□□ -0.13
CPEB3Q8NE35 AC142381.1-201ENST00000426099 345 ntBASIC14.22□□□□□ -0.13
CPEB3Q8NE35 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC14.22□□□□□ -0.13
CPEB3Q8NE35 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC14.22□□□□□ -0.13
CPEB3Q8NE35 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC14.22□□□□□ -0.13
CPEB3Q8NE35 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CPEB3Q8NE35 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC14.22□□□□□ -0.13
CPEB3Q8NE35 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC14.22□□□□□ -0.13
CPEB3Q8NE35 KRT8P23-201ENST00000560090 1207 ntBASIC14.22□□□□□ -0.13
CPEB3Q8NE35 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC14.22□□□□□ -0.13
CPEB3Q8NE35 AP000842.3-202ENST00000569238 1080 ntBASIC14.22□□□□□ -0.13
CPEB3Q8NE35 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC14.22□□□□□ -0.13
CPEB3Q8NE35 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC14.22□□□□□ -0.13
CPEB3Q8NE35 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC14.22□□□□□ -0.13
CPEB3Q8NE35 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC14.22□□□□□ -0.13
CPEB3Q8NE35 SPTSSB-204ENST00000617024 1292 ntBASIC14.22□□□□□ -0.13
CPEB3Q8NE35 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CPEB3Q8NE35 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CPEB3Q8NE35 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC14.22□□□□□ -0.13
CPEB3Q8NE35 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CPEB3Q8NE35 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CPEB3Q8NE35 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CPEB3Q8NE35 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CPEB3Q8NE35 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CPEB3Q8NE35 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC14.22□□□□□ -0.13
CPEB3Q8NE35 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms