Protein–RNA interactions for Protein: Q8N6L0

CCDC155, Protein KASH5, humanhuman

Predictions only

Length 562 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC155Q8N6L0 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC155Q8N6L0 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC18.4■□□□□ 0.54
CCDC155Q8N6L0 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC18.4■□□□□ 0.54
CCDC155Q8N6L0 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC155Q8N6L0 SLC9A3P2-201ENST00000447821 2021 ntBASIC18.4■□□□□ 0.54
CCDC155Q8N6L0 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC155Q8N6L0 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC155Q8N6L0 HARS-204ENST00000438307 1789 ntTSL 2 BASIC18.4■□□□□ 0.54
CCDC155Q8N6L0 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC155Q8N6L0 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC155Q8N6L0 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC18.4■□□□□ 0.54
CCDC155Q8N6L0 CYP2T1P-202ENST00000641596 2535 ntBASIC18.4■□□□□ 0.54
CCDC155Q8N6L0 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.54
CCDC155Q8N6L0 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
CCDC155Q8N6L0 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
CCDC155Q8N6L0 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC155Q8N6L0 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
CCDC155Q8N6L0 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC18.39■□□□□ 0.53
CCDC155Q8N6L0 AC026691.1-201ENST00000602502 2017 ntBASIC18.39■□□□□ 0.53
CCDC155Q8N6L0 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC155Q8N6L0 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC18.39■□□□□ 0.53
CCDC155Q8N6L0 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
CCDC155Q8N6L0 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC155Q8N6L0 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC155Q8N6L0 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC18.39■□□□□ 0.53
CCDC155Q8N6L0 AC142381.1-201ENST00000426099 345 ntBASIC18.39■□□□□ 0.53
CCDC155Q8N6L0 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC155Q8N6L0 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC155Q8N6L0 CR383656.12-201ENST00000549567 513 ntBASIC18.39■□□□□ 0.53
CCDC155Q8N6L0 AL138918.1-201ENST00000568306 659 ntBASIC18.39■□□□□ 0.53
CCDC155Q8N6L0 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC18.39■□□□□ 0.53
CCDC155Q8N6L0 AC004233.3-201ENST00000607794 1269 ntBASIC18.39■□□□□ 0.53
CCDC155Q8N6L0 AL590560.3-201ENST00000623350 461 ntBASIC18.39■□□□□ 0.53
CCDC155Q8N6L0 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC18.39■□□□□ 0.53
CCDC155Q8N6L0 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC155Q8N6L0 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC155Q8N6L0 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC155Q8N6L0 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC155Q8N6L0 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC18.39■□□□□ 0.53
CCDC155Q8N6L0 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC155Q8N6L0 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC18.39■□□□□ 0.53
CCDC155Q8N6L0 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC18.39■□□□□ 0.53
CCDC155Q8N6L0 OVCH1-AS1-204ENST00000641955 5529 ntBASIC18.39■□□□□ 0.53
CCDC155Q8N6L0 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC155Q8N6L0 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC18.38■□□□□ 0.53
CCDC155Q8N6L0 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
CCDC155Q8N6L0 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC155Q8N6L0 LINC00895-201ENST00000629028 1637 ntBASIC18.38■□□□□ 0.53
CCDC155Q8N6L0 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC155Q8N6L0 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC18.38■□□□□ 0.53
CCDC155Q8N6L0 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
CCDC155Q8N6L0 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
CCDC155Q8N6L0 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC18.38■□□□□ 0.53
CCDC155Q8N6L0 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC155Q8N6L0 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC155Q8N6L0 AC008894.3-201ENST00000624324 3103 ntBASIC18.38■□□□□ 0.53
CCDC155Q8N6L0 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
CCDC155Q8N6L0 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC155Q8N6L0 HNRNPA3P1-201ENST00000401429 1139 ntBASIC18.38■□□□□ 0.53
CCDC155Q8N6L0 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC18.38■□□□□ 0.53
CCDC155Q8N6L0 HNRNPA3P5-201ENST00000455201 833 ntBASIC18.38■□□□□ 0.53
CCDC155Q8N6L0 CCDC74BP1-201ENST00000508880 1123 ntBASIC18.38■□□□□ 0.53
CCDC155Q8N6L0 AP005018.1-201ENST00000525475 301 ntBASIC18.38■□□□□ 0.53
CCDC155Q8N6L0 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC18.38■□□□□ 0.53
CCDC155Q8N6L0 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
CCDC155Q8N6L0 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC155Q8N6L0 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC18.38■□□□□ 0.53
CCDC155Q8N6L0 AC073389.1-201ENST00000595595 795 ntBASIC18.38■□□□□ 0.53
CCDC155Q8N6L0 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC18.38■□□□□ 0.53
CCDC155Q8N6L0 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC155Q8N6L0 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC155Q8N6L0 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC18.38■□□□□ 0.53
CCDC155Q8N6L0 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC155Q8N6L0 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC155Q8N6L0 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
CCDC155Q8N6L0 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC155Q8N6L0 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
CCDC155Q8N6L0 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC155Q8N6L0 AC022144.1-201ENST00000602255 1580 ntBASIC18.38■□□□□ 0.53
CCDC155Q8N6L0 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC18.38■□□□□ 0.53
CCDC155Q8N6L0 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC18.38■□□□□ 0.53
CCDC155Q8N6L0 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC18.38■□□□□ 0.53
CCDC155Q8N6L0 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC155Q8N6L0 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC155Q8N6L0 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC155Q8N6L0 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC155Q8N6L0 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC155Q8N6L0 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC18.37■□□□□ 0.53
CCDC155Q8N6L0 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
CCDC155Q8N6L0 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC18.37■□□□□ 0.53
CCDC155Q8N6L0 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC155Q8N6L0 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC155Q8N6L0 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC18.37■□□□□ 0.53
CCDC155Q8N6L0 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC18.37■□□□□ 0.53
CCDC155Q8N6L0 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC18.37■□□□□ 0.53
CCDC155Q8N6L0 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC155Q8N6L0 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC18.37■□□□□ 0.53
CCDC155Q8N6L0 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC18.37■□□□□ 0.53
CCDC155Q8N6L0 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC18.37■□□□□ 0.53
CCDC155Q8N6L0 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 11.5 ms