Protein–RNA interactions for Protein: Q8IWT1

SCN4B, Sodium channel subunit beta-4, humanhuman

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4BQ8IWT1 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC17.08■□□□□ 0.33
SCN4BQ8IWT1 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
SCN4BQ8IWT1 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
SCN4BQ8IWT1 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SCN4BQ8IWT1 ME2P1-201ENST00000426028 1970 ntBASIC17.08■□□□□ 0.33
SCN4BQ8IWT1 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
SCN4BQ8IWT1 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
SCN4BQ8IWT1 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
SCN4BQ8IWT1 AL592424.1-201ENST00000563624 1536 ntBASIC17.08■□□□□ 0.32
SCN4BQ8IWT1 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC17.08■□□□□ 0.32
SCN4BQ8IWT1 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC17.08■□□□□ 0.32
SCN4BQ8IWT1 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC17.08■□□□□ 0.32
SCN4BQ8IWT1 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SCN4BQ8IWT1 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
SCN4BQ8IWT1 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SCN4BQ8IWT1 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
SCN4BQ8IWT1 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SCN4BQ8IWT1 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC17.08■□□□□ 0.32
SCN4BQ8IWT1 CENPM-206ENST00000407253 818 ntTSL 2 BASIC17.08■□□□□ 0.32
SCN4BQ8IWT1 MRPS18AP1-201ENST00000414458 589 ntBASIC17.08■□□□□ 0.32
SCN4BQ8IWT1 OARD1-208ENST00000469104 704 ntTSL 2 BASIC17.08■□□□□ 0.32
SCN4BQ8IWT1 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC17.08■□□□□ 0.32
SCN4BQ8IWT1 PRR29-209ENST00000582540 967 ntTSL 2 BASIC17.08■□□□□ 0.32
SCN4BQ8IWT1 LINC02560-201ENST00000596379 459 ntBASIC17.08■□□□□ 0.32
SCN4BQ8IWT1 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC17.08■□□□□ 0.32
SCN4BQ8IWT1 RAB34-223ENST00000636154 730 ntTSL 2 BASIC17.08■□□□□ 0.32
SCN4BQ8IWT1 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SCN4BQ8IWT1 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
SCN4BQ8IWT1 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.32
SCN4BQ8IWT1 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
SCN4BQ8IWT1 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SCN4BQ8IWT1 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC17.08■□□□□ 0.32
SCN4BQ8IWT1 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC17.08■□□□□ 0.32
SCN4BQ8IWT1 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
SCN4BQ8IWT1 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
SCN4BQ8IWT1 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
SCN4BQ8IWT1 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SCN4BQ8IWT1 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SCN4BQ8IWT1 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
SCN4BQ8IWT1 IMPDH1P4-201ENST00000445028 1534 ntBASIC17.07■□□□□ 0.32
SCN4BQ8IWT1 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC17.07■□□□□ 0.32
SCN4BQ8IWT1 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC17.07■□□□□ 0.32
SCN4BQ8IWT1 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC17.07■□□□□ 0.32
SCN4BQ8IWT1 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SCN4BQ8IWT1 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SCN4BQ8IWT1 AC087499.5-201ENST00000452760 1342 ntBASIC17.07■□□□□ 0.32
SCN4BQ8IWT1 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC17.07■□□□□ 0.32
SCN4BQ8IWT1 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SCN4BQ8IWT1 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SCN4BQ8IWT1 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SCN4BQ8IWT1 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SCN4BQ8IWT1 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SCN4BQ8IWT1 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC17.07■□□□□ 0.32
SCN4BQ8IWT1 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC17.07■□□□□ 0.32
SCN4BQ8IWT1 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC17.07■□□□□ 0.32
SCN4BQ8IWT1 TERF1P3-201ENST00000505638 1227 ntBASIC17.07■□□□□ 0.32
SCN4BQ8IWT1 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC17.07■□□□□ 0.32
SCN4BQ8IWT1 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SCN4BQ8IWT1 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC17.07■□□□□ 0.32
SCN4BQ8IWT1 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC17.07■□□□□ 0.32
SCN4BQ8IWT1 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SCN4BQ8IWT1 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SCN4BQ8IWT1 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SCN4BQ8IWT1 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
SCN4BQ8IWT1 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC17.07■□□□□ 0.32
SCN4BQ8IWT1 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
SCN4BQ8IWT1 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SCN4BQ8IWT1 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
SCN4BQ8IWT1 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SCN4BQ8IWT1 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
SCN4BQ8IWT1 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC17.07■□□□□ 0.32
SCN4BQ8IWT1 AC009053.2-201ENST00000563701 2365 ntBASIC17.07■□□□□ 0.32
SCN4BQ8IWT1 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC17.07■□□□□ 0.32
SCN4BQ8IWT1 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC17.07■□□□□ 0.32
SCN4BQ8IWT1 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SCN4BQ8IWT1 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
SCN4BQ8IWT1 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC17.06■□□□□ 0.32
SCN4BQ8IWT1 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC17.06■□□□□ 0.32
SCN4BQ8IWT1 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SCN4BQ8IWT1 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC17.06■□□□□ 0.32
SCN4BQ8IWT1 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SCN4BQ8IWT1 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SCN4BQ8IWT1 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC17.06■□□□□ 0.32
SCN4BQ8IWT1 TDG-209ENST00000544861 1387 ntTSL 2 BASIC17.06■□□□□ 0.32
SCN4BQ8IWT1 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
SCN4BQ8IWT1 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC17.06■□□□□ 0.32
SCN4BQ8IWT1 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SCN4BQ8IWT1 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SCN4BQ8IWT1 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
SCN4BQ8IWT1 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC17.06■□□□□ 0.32
SCN4BQ8IWT1 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC17.06■□□□□ 0.32
SCN4BQ8IWT1 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SCN4BQ8IWT1 KLK8-202ENST00000320838 456 ntTSL 5 BASIC17.06■□□□□ 0.32
SCN4BQ8IWT1 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SCN4BQ8IWT1 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SCN4BQ8IWT1 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC17.06■□□□□ 0.32
SCN4BQ8IWT1 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SCN4BQ8IWT1 STOM-203ENST00000538954 1257 ntTSL 5 BASIC17.06■□□□□ 0.32
SCN4BQ8IWT1 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC17.06■□□□□ 0.32
SCN4BQ8IWT1 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms