Protein–RNA interactions for Protein: Q8HWS3

RFX6, DNA-binding protein RFX6, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX6Q8HWS3 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC16.92■□□□□ 0.3
RFX6Q8HWS3 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
RFX6Q8HWS3 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
RFX6Q8HWS3 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RFX6Q8HWS3 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RFX6Q8HWS3 AC073439.1-201ENST00000624121 1774 ntBASIC16.92■□□□□ 0.3
RFX6Q8HWS3 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RFX6Q8HWS3 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RFX6Q8HWS3 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RFX6Q8HWS3 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
RFX6Q8HWS3 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RFX6Q8HWS3 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RFX6Q8HWS3 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RFX6Q8HWS3 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
RFX6Q8HWS3 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RFX6Q8HWS3 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC16.91■□□□□ 0.3
RFX6Q8HWS3 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
RFX6Q8HWS3 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
RFX6Q8HWS3 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RFX6Q8HWS3 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RFX6Q8HWS3 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RFX6Q8HWS3 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RFX6Q8HWS3 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
RFX6Q8HWS3 WASH6P-202ENST00000359512 1437 ntBASIC16.91■□□□□ 0.3
RFX6Q8HWS3 ACE-203ENST00000413513 2237 ntTSL 2 BASIC16.91■□□□□ 0.3
RFX6Q8HWS3 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
RFX6Q8HWS3 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
RFX6Q8HWS3 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RFX6Q8HWS3 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC16.91■□□□□ 0.3
RFX6Q8HWS3 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC16.91■□□□□ 0.3
RFX6Q8HWS3 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC16.91■□□□□ 0.3
RFX6Q8HWS3 AC106730.1-201ENST00000566722 1090 ntBASIC16.91■□□□□ 0.3
RFX6Q8HWS3 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC16.91■□□□□ 0.3
RFX6Q8HWS3 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC16.91■□□□□ 0.3
RFX6Q8HWS3 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC16.91■□□□□ 0.3
RFX6Q8HWS3 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC16.91■□□□□ 0.3
RFX6Q8HWS3 AC027601.4-201ENST00000611259 610 ntBASIC16.91■□□□□ 0.3
RFX6Q8HWS3 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RFX6Q8HWS3 AL161645.1-201ENST00000622716 1255 ntBASIC16.91■□□□□ 0.3
RFX6Q8HWS3 CAND2-206ENST00000626378 333 ntTSL 5 BASIC16.91■□□□□ 0.3
RFX6Q8HWS3 AC092865.6-201ENST00000642101 219 ntBASIC16.91■□□□□ 0.3
RFX6Q8HWS3 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
RFX6Q8HWS3 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RFX6Q8HWS3 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RFX6Q8HWS3 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RFX6Q8HWS3 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC16.91■□□□□ 0.3
RFX6Q8HWS3 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RFX6Q8HWS3 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC16.91■□□□□ 0.3
RFX6Q8HWS3 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RFX6Q8HWS3 AL139384.1-201ENST00000612143 3047 ntBASIC16.91■□□□□ 0.3
RFX6Q8HWS3 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC16.91■□□□□ 0.3
RFX6Q8HWS3 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RFX6Q8HWS3 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
RFX6Q8HWS3 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RFX6Q8HWS3 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC16.9■□□□□ 0.3
RFX6Q8HWS3 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
RFX6Q8HWS3 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RFX6Q8HWS3 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RFX6Q8HWS3 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
RFX6Q8HWS3 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC16.9■□□□□ 0.3
RFX6Q8HWS3 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RFX6Q8HWS3 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
RFX6Q8HWS3 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
RFX6Q8HWS3 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RFX6Q8HWS3 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RFX6Q8HWS3 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
RFX6Q8HWS3 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
RFX6Q8HWS3 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC16.9■□□□□ 0.3
RFX6Q8HWS3 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
RFX6Q8HWS3 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC16.9■□□□□ 0.3
RFX6Q8HWS3 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RFX6Q8HWS3 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RFX6Q8HWS3 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
RFX6Q8HWS3 KRT18P3-201ENST00000451602 1288 ntBASIC16.9■□□□□ 0.3
RFX6Q8HWS3 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC16.9■□□□□ 0.3
RFX6Q8HWS3 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RFX6Q8HWS3 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC16.9■□□□□ 0.3
RFX6Q8HWS3 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
RFX6Q8HWS3 AP002472.1-201ENST00000577490 586 ntBASIC16.9■□□□□ 0.3
RFX6Q8HWS3 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC16.9■□□□□ 0.3
RFX6Q8HWS3 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
RFX6Q8HWS3 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC16.9■□□□□ 0.3
RFX6Q8HWS3 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC16.9■□□□□ 0.3
RFX6Q8HWS3 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
RFX6Q8HWS3 AP003680.1-201ENST00000598970 3660 ntBASIC16.9■□□□□ 0.3
RFX6Q8HWS3 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC16.9■□□□□ 0.3
RFX6Q8HWS3 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RFX6Q8HWS3 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC16.9■□□□□ 0.3
RFX6Q8HWS3 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RFX6Q8HWS3 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RFX6Q8HWS3 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC16.9■□□□□ 0.3
RFX6Q8HWS3 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
RFX6Q8HWS3 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RFX6Q8HWS3 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC16.9■□□□□ 0.3
RFX6Q8HWS3 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RFX6Q8HWS3 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.3
RFX6Q8HWS3 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.3
RFX6Q8HWS3 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
RFX6Q8HWS3 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC16.89■□□□□ 0.3
RFX6Q8HWS3 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms