Protein–RNA interactions for Protein: Q86YS3

RAB11FIP4, Rab11 family-interacting protein 4, humanhuman

Predictions only

Length 637 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP4Q86YS3 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RAB11FIP4Q86YS3 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC19.06■□□□□ 0.64
RAB11FIP4Q86YS3 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
RAB11FIP4Q86YS3 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC19.06■□□□□ 0.64
RAB11FIP4Q86YS3 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
RAB11FIP4Q86YS3 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC19.06■□□□□ 0.64
RAB11FIP4Q86YS3 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
RAB11FIP4Q86YS3 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RAB11FIP4Q86YS3 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RAB11FIP4Q86YS3 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
RAB11FIP4Q86YS3 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
RAB11FIP4Q86YS3 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
RAB11FIP4Q86YS3 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC19.05■□□□□ 0.64
RAB11FIP4Q86YS3 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RAB11FIP4Q86YS3 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RAB11FIP4Q86YS3 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
RAB11FIP4Q86YS3 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
RAB11FIP4Q86YS3 CICP6-201ENST00000457191 2729 ntBASIC19.05■□□□□ 0.64
RAB11FIP4Q86YS3 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
RAB11FIP4Q86YS3 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC19.05■□□□□ 0.64
RAB11FIP4Q86YS3 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
RAB11FIP4Q86YS3 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RAB11FIP4Q86YS3 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC19.05■□□□□ 0.64
RAB11FIP4Q86YS3 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC19.05■□□□□ 0.64
RAB11FIP4Q86YS3 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
RAB11FIP4Q86YS3 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC19.05■□□□□ 0.64
RAB11FIP4Q86YS3 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC19.05■□□□□ 0.64
RAB11FIP4Q86YS3 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC19.05■□□□□ 0.64
RAB11FIP4Q86YS3 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
RAB11FIP4Q86YS3 AP000344.2-201ENST00000512987 629 ntBASIC19.05■□□□□ 0.64
RAB11FIP4Q86YS3 AC004835.2-201ENST00000603762 682 ntBASIC19.05■□□□□ 0.64
RAB11FIP4Q86YS3 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
RAB11FIP4Q86YS3 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
RAB11FIP4Q86YS3 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RAB11FIP4Q86YS3 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC19.05■□□□□ 0.64
RAB11FIP4Q86YS3 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
RAB11FIP4Q86YS3 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC19.05■□□□□ 0.64
RAB11FIP4Q86YS3 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC19.05■□□□□ 0.64
RAB11FIP4Q86YS3 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
RAB11FIP4Q86YS3 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC19.05■□□□□ 0.64
RAB11FIP4Q86YS3 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
RAB11FIP4Q86YS3 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC19.04■□□□□ 0.64
RAB11FIP4Q86YS3 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC19.04■□□□□ 0.64
RAB11FIP4Q86YS3 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
RAB11FIP4Q86YS3 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC19.04■□□□□ 0.64
RAB11FIP4Q86YS3 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC19.04■□□□□ 0.64
RAB11FIP4Q86YS3 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RAB11FIP4Q86YS3 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RAB11FIP4Q86YS3 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RAB11FIP4Q86YS3 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC19.04■□□□□ 0.64
RAB11FIP4Q86YS3 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
RAB11FIP4Q86YS3 RBPMS2P1-201ENST00000437762 623 ntBASIC19.04■□□□□ 0.64
RAB11FIP4Q86YS3 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC19.04■□□□□ 0.64
RAB11FIP4Q86YS3 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC19.04■□□□□ 0.64
RAB11FIP4Q86YS3 RNA5SP410-201ENST00000516285 106 ntBASIC19.04■□□□□ 0.64
RAB11FIP4Q86YS3 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RAB11FIP4Q86YS3 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
RAB11FIP4Q86YS3 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC19.04■□□□□ 0.64
RAB11FIP4Q86YS3 AP3S2-216ENST00000617003 1561 ntBASIC19.04■□□□□ 0.64
RAB11FIP4Q86YS3 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
RAB11FIP4Q86YS3 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC19.04■□□□□ 0.64
RAB11FIP4Q86YS3 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC19.04■□□□□ 0.64
RAB11FIP4Q86YS3 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC19.04■□□□□ 0.64
RAB11FIP4Q86YS3 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
RAB11FIP4Q86YS3 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC19.04■□□□□ 0.64
RAB11FIP4Q86YS3 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
RAB11FIP4Q86YS3 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC19.04■□□□□ 0.64
RAB11FIP4Q86YS3 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RAB11FIP4Q86YS3 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC19.04■□□□□ 0.64
RAB11FIP4Q86YS3 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RAB11FIP4Q86YS3 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RAB11FIP4Q86YS3 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC19.04■□□□□ 0.64
RAB11FIP4Q86YS3 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
RAB11FIP4Q86YS3 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
RAB11FIP4Q86YS3 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
RAB11FIP4Q86YS3 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
RAB11FIP4Q86YS3 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC19.03■□□□□ 0.64
RAB11FIP4Q86YS3 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RAB11FIP4Q86YS3 AL513523.2-202ENST00000427283 2040 ntBASIC19.03■□□□□ 0.64
RAB11FIP4Q86YS3 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
RAB11FIP4Q86YS3 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC19.03■□□□□ 0.64
RAB11FIP4Q86YS3 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC19.03■□□□□ 0.64
RAB11FIP4Q86YS3 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC19.03■□□□□ 0.64
RAB11FIP4Q86YS3 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC19.03■□□□□ 0.64
RAB11FIP4Q86YS3 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
RAB11FIP4Q86YS3 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RAB11FIP4Q86YS3 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC19.03■□□□□ 0.64
RAB11FIP4Q86YS3 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
RAB11FIP4Q86YS3 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC19.03■□□□□ 0.64
RAB11FIP4Q86YS3 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC19.03■□□□□ 0.64
RAB11FIP4Q86YS3 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
RAB11FIP4Q86YS3 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC19.03■□□□□ 0.64
RAB11FIP4Q86YS3 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC19.03■□□□□ 0.64
RAB11FIP4Q86YS3 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
RAB11FIP4Q86YS3 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
RAB11FIP4Q86YS3 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
RAB11FIP4Q86YS3 AL139400.1-201ENST00000366220 510 ntBASIC19.03■□□□□ 0.64
RAB11FIP4Q86YS3 AC254562.1-201ENST00000417586 456 ntBASIC19.03■□□□□ 0.64
RAB11FIP4Q86YS3 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC19.03■□□□□ 0.64
RAB11FIP4Q86YS3 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC19.03■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms