Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
SHFQ7M4L6 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SHFQ7M4L6 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC14.74□□□□□ -0.05
SHFQ7M4L6 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
SHFQ7M4L6 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SHFQ7M4L6 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SHFQ7M4L6 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
SHFQ7M4L6 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
SHFQ7M4L6 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
SHFQ7M4L6 PGR-210ENST00000619228 3038 ntTSL 5 BASIC14.74□□□□□ -0.05
SHFQ7M4L6 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC14.73□□□□□ -0.05
SHFQ7M4L6 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SHFQ7M4L6 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
SHFQ7M4L6 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC14.73□□□□□ -0.05
SHFQ7M4L6 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SHFQ7M4L6 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
SHFQ7M4L6 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC14.73□□□□□ -0.05
SHFQ7M4L6 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
SHFQ7M4L6 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SHFQ7M4L6 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SHFQ7M4L6 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
SHFQ7M4L6 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
SHFQ7M4L6 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
SHFQ7M4L6 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SHFQ7M4L6 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SHFQ7M4L6 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC14.73□□□□□ -0.05
SHFQ7M4L6 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
SHFQ7M4L6 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
SHFQ7M4L6 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
SHFQ7M4L6 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC14.73□□□□□ -0.05
SHFQ7M4L6 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SHFQ7M4L6 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
SHFQ7M4L6 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC14.73□□□□□ -0.05
SHFQ7M4L6 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
SHFQ7M4L6 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SHFQ7M4L6 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
SHFQ7M4L6 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC14.73□□□□□ -0.05
SHFQ7M4L6 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
SHFQ7M4L6 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
SHFQ7M4L6 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC14.73□□□□□ -0.05
SHFQ7M4L6 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC14.73□□□□□ -0.05
SHFQ7M4L6 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC14.73□□□□□ -0.05
SHFQ7M4L6 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SHFQ7M4L6 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
SHFQ7M4L6 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC14.73□□□□□ -0.05
SHFQ7M4L6 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC14.73□□□□□ -0.05
SHFQ7M4L6 STARD13-205ENST00000439831 945 ntTSL 2 BASIC14.73□□□□□ -0.05
SHFQ7M4L6 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC14.73□□□□□ -0.05
SHFQ7M4L6 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC14.73□□□□□ -0.05
SHFQ7M4L6 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC14.73□□□□□ -0.05
SHFQ7M4L6 PNMT-203ENST00000581428 677 ntTSL 2 BASIC14.73□□□□□ -0.05
SHFQ7M4L6 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC14.73□□□□□ -0.05
SHFQ7M4L6 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SHFQ7M4L6 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC14.73□□□□□ -0.05
SHFQ7M4L6 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC14.73□□□□□ -0.05
SHFQ7M4L6 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC14.73□□□□□ -0.05
SHFQ7M4L6 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC14.73□□□□□ -0.05
SHFQ7M4L6 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SHFQ7M4L6 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
SHFQ7M4L6 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
SHFQ7M4L6 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
SHFQ7M4L6 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SHFQ7M4L6 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC14.73□□□□□ -0.05
SHFQ7M4L6 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
SHFQ7M4L6 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
SHFQ7M4L6 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SHFQ7M4L6 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
SHFQ7M4L6 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
SHFQ7M4L6 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SHFQ7M4L6 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
SHFQ7M4L6 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC14.73□□□□□ -0.05
SHFQ7M4L6 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
SHFQ7M4L6 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SHFQ7M4L6 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
SHFQ7M4L6 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
SHFQ7M4L6 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
SHFQ7M4L6 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SHFQ7M4L6 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC14.72□□□□□ -0.05
SHFQ7M4L6 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SHFQ7M4L6 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
SHFQ7M4L6 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SHFQ7M4L6 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC14.72□□□□□ -0.05
SHFQ7M4L6 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SHFQ7M4L6 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
SHFQ7M4L6 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
SHFQ7M4L6 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
SHFQ7M4L6 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SHFQ7M4L6 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC14.72□□□□□ -0.05
SHFQ7M4L6 AC016027.1-202ENST00000607927 1699 ntBASIC14.72□□□□□ -0.05
SHFQ7M4L6 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SHFQ7M4L6 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
SHFQ7M4L6 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC14.72□□□□□ -0.05
SHFQ7M4L6 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SHFQ7M4L6 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
SHFQ7M4L6 TPO-203ENST00000346956 2923 ntTSL 5 BASIC14.72□□□□□ -0.05
SHFQ7M4L6 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC14.72□□□□□ -0.05
SHFQ7M4L6 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC14.72□□□□□ -0.05
SHFQ7M4L6 RPS15P9-201ENST00000494093 319 ntBASIC14.72□□□□□ -0.05
SHFQ7M4L6 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC14.72□□□□□ -0.05
SHFQ7M4L6 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC14.72□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms