Protein–RNA interactions for Protein: Q6PIL6

KCNIP4, Kv channel-interacting protein 4, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP4Q6PIL6 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
KCNIP4Q6PIL6 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
KCNIP4Q6PIL6 ILF2-202ENST00000368681 726 ntTSL 2 BASIC12.64□□□□□ -0.39
KCNIP4Q6PIL6 GAD2-202ENST00000376248 680 ntTSL 5 BASIC12.64□□□□□ -0.39
KCNIP4Q6PIL6 MIR648-201ENST00000385046 94 ntBASIC12.64□□□□□ -0.39
KCNIP4Q6PIL6 COX5BP2-201ENST00000392354 334 ntBASIC12.64□□□□□ -0.39
KCNIP4Q6PIL6 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC12.64□□□□□ -0.39
KCNIP4Q6PIL6 HMGA1P5-201ENST00000412453 271 ntBASIC12.64□□□□□ -0.39
KCNIP4Q6PIL6 PVRIG2P-201ENST00000435460 978 ntBASIC12.64□□□□□ -0.39
KCNIP4Q6PIL6 AC007663.1-201ENST00000438948 1240 ntBASIC12.64□□□□□ -0.39
KCNIP4Q6PIL6 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC12.64□□□□□ -0.39
KCNIP4Q6PIL6 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC12.64□□□□□ -0.39
KCNIP4Q6PIL6 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
KCNIP4Q6PIL6 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
KCNIP4Q6PIL6 AC109462.3-201ENST00000573934 613 ntBASIC12.64□□□□□ -0.39
KCNIP4Q6PIL6 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC12.64□□□□□ -0.39
KCNIP4Q6PIL6 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC12.64□□□□□ -0.39
KCNIP4Q6PIL6 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
KCNIP4Q6PIL6 TICRR-201ENST00000268138 6775 ntAPPRIS P3 TSL 5 BASIC12.64□□□□□ -0.39
KCNIP4Q6PIL6 MBTD1-204ENST00000586178 5382 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
KCNIP4Q6PIL6 MED14-201ENST00000324817 7984 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
KCNIP4Q6PIL6 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC12.64□□□□□ -0.39
KCNIP4Q6PIL6 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC12.64□□□□□ -0.39
KCNIP4Q6PIL6 PTPRS-204ENST00000587303 6353 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
KCNIP4Q6PIL6 HIC2-203ENST00000443632 6940 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
KCNIP4Q6PIL6 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
KCNIP4Q6PIL6 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
KCNIP4Q6PIL6 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
KCNIP4Q6PIL6 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC12.64□□□□□ -0.39
KCNIP4Q6PIL6 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
KCNIP4Q6PIL6 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
KCNIP4Q6PIL6 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC12.64□□□□□ -0.39
KCNIP4Q6PIL6 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
KCNIP4Q6PIL6 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
KCNIP4Q6PIL6 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
KCNIP4Q6PIL6 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
KCNIP4Q6PIL6 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
KCNIP4Q6PIL6 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
KCNIP4Q6PIL6 AC092338.2-201ENST00000568827 1415 ntBASIC12.63□□□□□ -0.39
KCNIP4Q6PIL6 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
KCNIP4Q6PIL6 TBC1D3P5-201ENST00000579401 1545 ntBASIC12.63□□□□□ -0.39
KCNIP4Q6PIL6 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
KCNIP4Q6PIL6 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
KCNIP4Q6PIL6 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC12.63□□□□□ -0.39
KCNIP4Q6PIL6 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
KCNIP4Q6PIL6 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
KCNIP4Q6PIL6 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
KCNIP4Q6PIL6 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC12.63□□□□□ -0.39
KCNIP4Q6PIL6 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
KCNIP4Q6PIL6 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
KCNIP4Q6PIL6 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC12.63□□□□□ -0.39
KCNIP4Q6PIL6 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
KCNIP4Q6PIL6 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC12.63□□□□□ -0.39
KCNIP4Q6PIL6 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
KCNIP4Q6PIL6 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
KCNIP4Q6PIL6 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
KCNIP4Q6PIL6 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
KCNIP4Q6PIL6 POU5F1P6-201ENST00000466990 990 ntBASIC12.63□□□□□ -0.39
KCNIP4Q6PIL6 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC12.63□□□□□ -0.39
KCNIP4Q6PIL6 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC12.63□□□□□ -0.39
KCNIP4Q6PIL6 AC004817.3-201ENST00000602957 2129 ntBASIC12.63□□□□□ -0.39
KCNIP4Q6PIL6 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
KCNIP4Q6PIL6 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
KCNIP4Q6PIL6 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC12.63□□□□□ -0.39
KCNIP4Q6PIL6 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC12.63□□□□□ -0.39
KCNIP4Q6PIL6 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
KCNIP4Q6PIL6 AC007686.3-201ENST00000619017 3487 ntBASIC12.63□□□□□ -0.39
KCNIP4Q6PIL6 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC12.63□□□□□ -0.39
KCNIP4Q6PIL6 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
KCNIP4Q6PIL6 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
KCNIP4Q6PIL6 USP19-208ENST00000453664 4719 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
KCNIP4Q6PIL6 SLC35D1-201ENST00000235345 6162 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
KCNIP4Q6PIL6 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC12.63□□□□□ -0.39
KCNIP4Q6PIL6 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
KCNIP4Q6PIL6 SRGAP3-201ENST00000360413 8415 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
KCNIP4Q6PIL6 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC12.63□□□□□ -0.39
KCNIP4Q6PIL6 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
KCNIP4Q6PIL6 SACM1L-201ENST00000389061 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
KCNIP4Q6PIL6 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC12.63□□□□□ -0.39
KCNIP4Q6PIL6 AC015802.6-201ENST00000640006 5654 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
KCNIP4Q6PIL6 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC12.63□□□□□ -0.39
KCNIP4Q6PIL6 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC12.63□□□□□ -0.39
KCNIP4Q6PIL6 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC12.63□□□□□ -0.39
KCNIP4Q6PIL6 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
KCNIP4Q6PIL6 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC12.62□□□□□ -0.39
KCNIP4Q6PIL6 FUT8-AS1-201ENST00000621019 1521 ntBASIC12.62□□□□□ -0.39
KCNIP4Q6PIL6 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
KCNIP4Q6PIL6 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
KCNIP4Q6PIL6 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC12.62□□□□□ -0.39
KCNIP4Q6PIL6 ARHGAP23P1-201ENST00000562773 1937 ntBASIC12.62□□□□□ -0.39
KCNIP4Q6PIL6 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
KCNIP4Q6PIL6 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
KCNIP4Q6PIL6 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
KCNIP4Q6PIL6 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
KCNIP4Q6PIL6 CX3CL1-204ENST00000565912 5796 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
KCNIP4Q6PIL6 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
KCNIP4Q6PIL6 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
KCNIP4Q6PIL6 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
KCNIP4Q6PIL6 AC013726.1-201ENST00000563747 2285 ntBASIC12.62□□□□□ -0.39
KCNIP4Q6PIL6 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC12.62□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms