Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC16.95■□□□□ 0.3
RFWD3Q6PCD5 AC093724.1-201ENST00000448659 1027 ntBASIC16.95■□□□□ 0.3
RFWD3Q6PCD5 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
RFWD3Q6PCD5 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC16.95■□□□□ 0.3
RFWD3Q6PCD5 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RFWD3Q6PCD5 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC16.95■□□□□ 0.3
RFWD3Q6PCD5 SPTSSB-204ENST00000617024 1292 ntBASIC16.95■□□□□ 0.3
RFWD3Q6PCD5 MIR6080-201ENST00000617359 66 ntBASIC16.95■□□□□ 0.3
RFWD3Q6PCD5 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC16.95■□□□□ 0.3
RFWD3Q6PCD5 GOLGA2P9-201ENST00000596977 1937 ntBASIC16.95■□□□□ 0.3
RFWD3Q6PCD5 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC16.95■□□□□ 0.3
RFWD3Q6PCD5 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
RFWD3Q6PCD5 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
RFWD3Q6PCD5 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
RFWD3Q6PCD5 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC16.95■□□□□ 0.3
RFWD3Q6PCD5 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
RFWD3Q6PCD5 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RFWD3Q6PCD5 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
RFWD3Q6PCD5 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
RFWD3Q6PCD5 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC16.94■□□□□ 0.3
RFWD3Q6PCD5 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
RFWD3Q6PCD5 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RFWD3Q6PCD5 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RFWD3Q6PCD5 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
RFWD3Q6PCD5 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
RFWD3Q6PCD5 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RFWD3Q6PCD5 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC16.94■□□□□ 0.3
RFWD3Q6PCD5 CNN2P2-201ENST00000443536 909 ntBASIC16.94■□□□□ 0.3
RFWD3Q6PCD5 CNN2P3-201ENST00000450201 906 ntBASIC16.94■□□□□ 0.3
RFWD3Q6PCD5 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC16.94■□□□□ 0.3
RFWD3Q6PCD5 DUX4L27-201ENST00000554796 1261 ntBASIC16.94■□□□□ 0.3
RFWD3Q6PCD5 RARRES2P9-201ENST00000565168 469 ntBASIC16.94■□□□□ 0.3
RFWD3Q6PCD5 AL136317.3-201ENST00000618497 906 ntBASIC16.94■□□□□ 0.3
RFWD3Q6PCD5 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC16.94■□□□□ 0.3
RFWD3Q6PCD5 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RFWD3Q6PCD5 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RFWD3Q6PCD5 ALOX12P2-203ENST00000570921 1945 ntBASIC16.94■□□□□ 0.3
RFWD3Q6PCD5 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
RFWD3Q6PCD5 TUBB3P1-201ENST00000405796 1332 ntBASIC16.94■□□□□ 0.3
RFWD3Q6PCD5 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC16.93■□□□□ 0.3
RFWD3Q6PCD5 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RFWD3Q6PCD5 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC16.93■□□□□ 0.3
RFWD3Q6PCD5 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
RFWD3Q6PCD5 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC16.93■□□□□ 0.3
RFWD3Q6PCD5 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
RFWD3Q6PCD5 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC16.93■□□□□ 0.3
RFWD3Q6PCD5 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RFWD3Q6PCD5 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RFWD3Q6PCD5 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RFWD3Q6PCD5 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
RFWD3Q6PCD5 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC16.93■□□□□ 0.3
RFWD3Q6PCD5 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RFWD3Q6PCD5 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
RFWD3Q6PCD5 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
RFWD3Q6PCD5 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC16.93■□□□□ 0.3
RFWD3Q6PCD5 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RFWD3Q6PCD5 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
RFWD3Q6PCD5 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC16.93■□□□□ 0.3
RFWD3Q6PCD5 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RFWD3Q6PCD5 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
RFWD3Q6PCD5 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RFWD3Q6PCD5 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RFWD3Q6PCD5 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RFWD3Q6PCD5 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
RFWD3Q6PCD5 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC16.93■□□□□ 0.3
RFWD3Q6PCD5 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC16.93■□□□□ 0.3
RFWD3Q6PCD5 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC16.93■□□□□ 0.3
RFWD3Q6PCD5 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC16.93■□□□□ 0.3
RFWD3Q6PCD5 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC16.93■□□□□ 0.3
RFWD3Q6PCD5 MIR4453-201ENST00000584019 89 ntBASIC16.93■□□□□ 0.3
RFWD3Q6PCD5 FHL2-212ENST00000607522 759 ntTSL 2 BASIC16.93■□□□□ 0.3
RFWD3Q6PCD5 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
RFWD3Q6PCD5 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC16.93■□□□□ 0.3
RFWD3Q6PCD5 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RFWD3Q6PCD5 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
RFWD3Q6PCD5 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
RFWD3Q6PCD5 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC16.93■□□□□ 0.3
RFWD3Q6PCD5 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC16.93■□□□□ 0.3
RFWD3Q6PCD5 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RFWD3Q6PCD5 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC16.93■□□□□ 0.3
RFWD3Q6PCD5 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC16.93■□□□□ 0.3
RFWD3Q6PCD5 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RFWD3Q6PCD5 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
RFWD3Q6PCD5 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC16.93■□□□□ 0.3
RFWD3Q6PCD5 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC16.93■□□□□ 0.3
RFWD3Q6PCD5 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC16.93■□□□□ 0.3
RFWD3Q6PCD5 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
RFWD3Q6PCD5 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC16.93■□□□□ 0.3
RFWD3Q6PCD5 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC16.93■□□□□ 0.3
RFWD3Q6PCD5 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC16.93■□□□□ 0.3
RFWD3Q6PCD5 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
RFWD3Q6PCD5 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC16.92■□□□□ 0.3
RFWD3Q6PCD5 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC16.92■□□□□ 0.3
RFWD3Q6PCD5 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RFWD3Q6PCD5 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC16.92■□□□□ 0.3
RFWD3Q6PCD5 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
RFWD3Q6PCD5 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RFWD3Q6PCD5 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC16.92■□□□□ 0.3
RFWD3Q6PCD5 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RFWD3Q6PCD5 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC16.92■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms