Protein–RNA interactions for Protein: Q6P4E1

CASC4, Protein CASC4, humanhuman

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4Q6P4E1 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC16.62■□□□□ 0.25
CASC4Q6P4E1 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC16.62■□□□□ 0.25
CASC4Q6P4E1 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
CASC4Q6P4E1 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CASC4Q6P4E1 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC16.62■□□□□ 0.25
CASC4Q6P4E1 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
CASC4Q6P4E1 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CASC4Q6P4E1 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CASC4Q6P4E1 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CASC4Q6P4E1 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC16.62■□□□□ 0.25
CASC4Q6P4E1 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CASC4Q6P4E1 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CASC4Q6P4E1 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CASC4Q6P4E1 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC16.62■□□□□ 0.25
CASC4Q6P4E1 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CASC4Q6P4E1 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
CASC4Q6P4E1 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CASC4Q6P4E1 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
CASC4Q6P4E1 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CASC4Q6P4E1 PPIE-208ENST00000470213 927 ntTSL 3 BASIC16.62■□□□□ 0.25
CASC4Q6P4E1 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC16.62■□□□□ 0.25
CASC4Q6P4E1 PP7080-204ENST00000510714 601 ntTSL 3 BASIC16.62■□□□□ 0.25
CASC4Q6P4E1 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC16.62■□□□□ 0.25
CASC4Q6P4E1 AP001005.1-201ENST00000571755 1248 ntBASIC16.62■□□□□ 0.25
CASC4Q6P4E1 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CASC4Q6P4E1 LITAF-211ENST00000572255 516 ntTSL 4 BASIC16.62■□□□□ 0.25
CASC4Q6P4E1 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
CASC4Q6P4E1 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC16.62■□□□□ 0.25
CASC4Q6P4E1 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC16.62■□□□□ 0.25
CASC4Q6P4E1 U82695.1-201ENST00000635752 1889 ntBASIC16.62■□□□□ 0.25
CASC4Q6P4E1 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
CASC4Q6P4E1 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CASC4Q6P4E1 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC16.62■□□□□ 0.25
CASC4Q6P4E1 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC16.62■□□□□ 0.25
CASC4Q6P4E1 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC16.62■□□□□ 0.25
CASC4Q6P4E1 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CASC4Q6P4E1 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CASC4Q6P4E1 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CASC4Q6P4E1 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
CASC4Q6P4E1 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CASC4Q6P4E1 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC16.62■□□□□ 0.25
CASC4Q6P4E1 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CASC4Q6P4E1 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CASC4Q6P4E1 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
CASC4Q6P4E1 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC16.61■□□□□ 0.25
CASC4Q6P4E1 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CASC4Q6P4E1 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
CASC4Q6P4E1 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CASC4Q6P4E1 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC16.61■□□□□ 0.25
CASC4Q6P4E1 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
CASC4Q6P4E1 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC16.61■□□□□ 0.25
CASC4Q6P4E1 AL592424.1-201ENST00000563624 1536 ntBASIC16.61■□□□□ 0.25
CASC4Q6P4E1 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC16.61■□□□□ 0.25
CASC4Q6P4E1 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC16.61■□□□□ 0.25
CASC4Q6P4E1 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CASC4Q6P4E1 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CASC4Q6P4E1 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
CASC4Q6P4E1 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CASC4Q6P4E1 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CASC4Q6P4E1 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CASC4Q6P4E1 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
CASC4Q6P4E1 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC16.61■□□□□ 0.25
CASC4Q6P4E1 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CASC4Q6P4E1 MRPL3P1-201ENST00000400109 1033 ntBASIC16.61■□□□□ 0.25
CASC4Q6P4E1 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CASC4Q6P4E1 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC16.61■□□□□ 0.25
CASC4Q6P4E1 AC009947.1-201ENST00000444350 727 ntBASIC16.61■□□□□ 0.25
CASC4Q6P4E1 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CASC4Q6P4E1 RNA5SP415-201ENST00000517246 115 ntBASIC16.61■□□□□ 0.25
CASC4Q6P4E1 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC16.61■□□□□ 0.25
CASC4Q6P4E1 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC16.61■□□□□ 0.25
CASC4Q6P4E1 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CASC4Q6P4E1 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC16.61■□□□□ 0.25
CASC4Q6P4E1 AC104692.2-201ENST00000603054 253 ntBASIC16.61■□□□□ 0.25
CASC4Q6P4E1 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC16.61■□□□□ 0.25
CASC4Q6P4E1 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CASC4Q6P4E1 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CASC4Q6P4E1 CDC14C-201ENST00000428251 1719 ntBASIC16.61■□□□□ 0.25
CASC4Q6P4E1 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CASC4Q6P4E1 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
CASC4Q6P4E1 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CASC4Q6P4E1 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CASC4Q6P4E1 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC16.61■□□□□ 0.25
CASC4Q6P4E1 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CASC4Q6P4E1 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CASC4Q6P4E1 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CASC4Q6P4E1 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CASC4Q6P4E1 AP002414.2-201ENST00000591780 3365 ntBASIC16.61■□□□□ 0.25
CASC4Q6P4E1 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CASC4Q6P4E1 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC16.61■□□□□ 0.25
CASC4Q6P4E1 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC16.61■□□□□ 0.25
CASC4Q6P4E1 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CASC4Q6P4E1 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CASC4Q6P4E1 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
CASC4Q6P4E1 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CASC4Q6P4E1 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC16.61■□□□□ 0.25
CASC4Q6P4E1 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CASC4Q6P4E1 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC16.6■□□□□ 0.25
CASC4Q6P4E1 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CASC4Q6P4E1 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 82 ms