Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC20.12■□□□□ 0.81
RC3H1Q5TC82 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
RC3H1Q5TC82 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
RC3H1Q5TC82 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RC3H1Q5TC82 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
RC3H1Q5TC82 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC20.12■□□□□ 0.81
RC3H1Q5TC82 AL121723.1-201ENST00000445194 1519 ntBASIC20.12■□□□□ 0.81
RC3H1Q5TC82 VILL-207ENST00000465644 1857 ntTSL 5 BASIC20.11■□□□□ 0.81
RC3H1Q5TC82 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
RC3H1Q5TC82 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
RC3H1Q5TC82 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
RC3H1Q5TC82 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RC3H1Q5TC82 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
RC3H1Q5TC82 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
RC3H1Q5TC82 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RC3H1Q5TC82 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RC3H1Q5TC82 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
RC3H1Q5TC82 MIR326-201ENST00000362220 95 ntBASIC20.11■□□□□ 0.81
RC3H1Q5TC82 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC20.11■□□□□ 0.81
RC3H1Q5TC82 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
RC3H1Q5TC82 OLR1-203ENST00000432556 950 ntTSL 2 BASIC20.11■□□□□ 0.81
RC3H1Q5TC82 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC20.11■□□□□ 0.81
RC3H1Q5TC82 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC20.11■□□□□ 0.81
RC3H1Q5TC82 KRT18P43-201ENST00000469825 1281 ntBASIC20.11■□□□□ 0.81
RC3H1Q5TC82 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
RC3H1Q5TC82 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC20.11■□□□□ 0.81
RC3H1Q5TC82 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
RC3H1Q5TC82 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC20.11■□□□□ 0.81
RC3H1Q5TC82 KSR1-207ENST00000578981 748 ntTSL 4 BASIC20.11■□□□□ 0.81
RC3H1Q5TC82 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC20.11■□□□□ 0.81
RC3H1Q5TC82 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC20.11■□□□□ 0.81
RC3H1Q5TC82 AL118558.3-201ENST00000607414 1079 ntBASIC20.11■□□□□ 0.81
RC3H1Q5TC82 AC139713.2-201ENST00000641328 2723 ntBASIC20.11■□□□□ 0.81
RC3H1Q5TC82 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RC3H1Q5TC82 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
RC3H1Q5TC82 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
RC3H1Q5TC82 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RC3H1Q5TC82 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC20.11■□□□□ 0.81
RC3H1Q5TC82 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RC3H1Q5TC82 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC20.11■□□□□ 0.81
RC3H1Q5TC82 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
RC3H1Q5TC82 AC020763.4-201ENST00000623414 4170 ntBASIC20.11■□□□□ 0.81
RC3H1Q5TC82 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC20.11■□□□□ 0.81
RC3H1Q5TC82 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC20.11■□□□□ 0.81
RC3H1Q5TC82 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
RC3H1Q5TC82 PCDHB18P-201ENST00000524813 2368 ntBASIC20.1■□□□□ 0.81
RC3H1Q5TC82 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RC3H1Q5TC82 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC20.1■□□□□ 0.81
RC3H1Q5TC82 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC20.1■□□□□ 0.81
RC3H1Q5TC82 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
RC3H1Q5TC82 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RC3H1Q5TC82 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RC3H1Q5TC82 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
RC3H1Q5TC82 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
RC3H1Q5TC82 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
RC3H1Q5TC82 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC20.1■□□□□ 0.81
RC3H1Q5TC82 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC20.1■□□□□ 0.81
RC3H1Q5TC82 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
RC3H1Q5TC82 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC20.1■□□□□ 0.81
RC3H1Q5TC82 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
RC3H1Q5TC82 AC005915.1-201ENST00000624912 2018 ntBASIC20.1■□□□□ 0.81
RC3H1Q5TC82 CYP2AB1P-202ENST00000454440 1456 ntBASIC20.1■□□□□ 0.81
RC3H1Q5TC82 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
RC3H1Q5TC82 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC20.1■□□□□ 0.81
RC3H1Q5TC82 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
RC3H1Q5TC82 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
RC3H1Q5TC82 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
RC3H1Q5TC82 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RC3H1Q5TC82 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC20.09■□□□□ 0.81
RC3H1Q5TC82 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RC3H1Q5TC82 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RC3H1Q5TC82 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
RC3H1Q5TC82 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
RC3H1Q5TC82 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
RC3H1Q5TC82 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RC3H1Q5TC82 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RC3H1Q5TC82 REXO1L1P-202ENST00000608646 1974 ntBASIC20.09■□□□□ 0.81
RC3H1Q5TC82 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RC3H1Q5TC82 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
RC3H1Q5TC82 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RC3H1Q5TC82 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
RC3H1Q5TC82 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
RC3H1Q5TC82 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC20.09■□□□□ 0.81
RC3H1Q5TC82 HLA-DPB2-205ENST00000435074 1188 ntBASIC20.09■□□□□ 0.81
RC3H1Q5TC82 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC20.09■□□□□ 0.81
RC3H1Q5TC82 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC20.09■□□□□ 0.81
RC3H1Q5TC82 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC20.09■□□□□ 0.81
RC3H1Q5TC82 AHRR-211ENST00000515206 462 ntTSL 5 BASIC20.09■□□□□ 0.81
RC3H1Q5TC82 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC20.09■□□□□ 0.81
RC3H1Q5TC82 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC20.09■□□□□ 0.81
RC3H1Q5TC82 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC20.09■□□□□ 0.81
RC3H1Q5TC82 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC20.09■□□□□ 0.81
RC3H1Q5TC82 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC20.09■□□□□ 0.81
RC3H1Q5TC82 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RC3H1Q5TC82 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
RC3H1Q5TC82 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC20.09■□□□□ 0.81
RC3H1Q5TC82 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RC3H1Q5TC82 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RC3H1Q5TC82 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC20.09■□□□□ 0.81
RC3H1Q5TC82 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms