Protein–RNA interactions for Protein: Q5TC12

ATPAF1, ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

Predicted RBP Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1Q5TC12 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC14.16□□□□□ -0.14
ATPAF1Q5TC12 AC034105.1-201ENST00000563488 319 ntBASIC14.16□□□□□ -0.14
ATPAF1Q5TC12 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ATPAF1Q5TC12 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC14.16□□□□□ -0.14
ATPAF1Q5TC12 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ATPAF1Q5TC12 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
ATPAF1Q5TC12 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
ATPAF1Q5TC12 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC14.16□□□□□ -0.14
ATPAF1Q5TC12 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ATPAF1Q5TC12 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ATPAF1Q5TC12 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC14.16□□□□□ -0.14
ATPAF1Q5TC12 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
ATPAF1Q5TC12 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ATPAF1Q5TC12 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ATPAF1Q5TC12 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ATPAF1Q5TC12 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC14.16□□□□□ -0.14
ATPAF1Q5TC12 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC14.16□□□□□ -0.14
ATPAF1Q5TC12 SP100-205ENST00000409824 1802 ntTSL 5 BASIC14.15□□□□□ -0.14
ATPAF1Q5TC12 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ATPAF1Q5TC12 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC14.15□□□□□ -0.14
ATPAF1Q5TC12 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC14.15□□□□□ -0.14
ATPAF1Q5TC12 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ATPAF1Q5TC12 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
ATPAF1Q5TC12 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ATPAF1Q5TC12 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC14.15□□□□□ -0.14
ATPAF1Q5TC12 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ATPAF1Q5TC12 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ATPAF1Q5TC12 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
ATPAF1Q5TC12 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
ATPAF1Q5TC12 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
ATPAF1Q5TC12 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ATPAF1Q5TC12 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
ATPAF1Q5TC12 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
ATPAF1Q5TC12 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC14.15□□□□□ -0.14
ATPAF1Q5TC12 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
ATPAF1Q5TC12 AC006058.4-201ENST00000624016 1670 ntBASIC14.15□□□□□ -0.14
ATPAF1Q5TC12 ZNF259P1-201ENST00000407656 1365 ntBASIC14.15□□□□□ -0.14
ATPAF1Q5TC12 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC14.15□□□□□ -0.14
ATPAF1Q5TC12 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
ATPAF1Q5TC12 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC14.15□□□□□ -0.14
ATPAF1Q5TC12 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC14.15□□□□□ -0.14
ATPAF1Q5TC12 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ATPAF1Q5TC12 LBH-204ENST00000406087 559 ntTSL 4 BASIC14.15□□□□□ -0.14
ATPAF1Q5TC12 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC14.15□□□□□ -0.14
ATPAF1Q5TC12 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC14.15□□□□□ -0.14
ATPAF1Q5TC12 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC14.15□□□□□ -0.14
ATPAF1Q5TC12 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
ATPAF1Q5TC12 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC14.15□□□□□ -0.14
ATPAF1Q5TC12 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
ATPAF1Q5TC12 AC106730.1-201ENST00000566722 1090 ntBASIC14.15□□□□□ -0.14
ATPAF1Q5TC12 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC14.15□□□□□ -0.14
ATPAF1Q5TC12 AC091167.2-201ENST00000579581 588 ntBASIC14.15□□□□□ -0.14
ATPAF1Q5TC12 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC14.15□□□□□ -0.14
ATPAF1Q5TC12 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC14.15□□□□□ -0.14
ATPAF1Q5TC12 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
ATPAF1Q5TC12 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
ATPAF1Q5TC12 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC14.15□□□□□ -0.14
ATPAF1Q5TC12 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ATPAF1Q5TC12 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ATPAF1Q5TC12 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
ATPAF1Q5TC12 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC14.15□□□□□ -0.14
ATPAF1Q5TC12 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ATPAF1Q5TC12 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
ATPAF1Q5TC12 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ATPAF1Q5TC12 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC14.15□□□□□ -0.14
ATPAF1Q5TC12 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
ATPAF1Q5TC12 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
ATPAF1Q5TC12 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC14.15□□□□□ -0.14
ATPAF1Q5TC12 AC104109.2-201ENST00000602919 1418 ntBASIC14.15□□□□□ -0.14
ATPAF1Q5TC12 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC14.15□□□□□ -0.14
ATPAF1Q5TC12 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC14.15□□□□□ -0.14
ATPAF1Q5TC12 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
ATPAF1Q5TC12 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
ATPAF1Q5TC12 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
ATPAF1Q5TC12 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ATPAF1Q5TC12 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
ATPAF1Q5TC12 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
ATPAF1Q5TC12 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ATPAF1Q5TC12 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
ATPAF1Q5TC12 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ATPAF1Q5TC12 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ATPAF1Q5TC12 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC14.14□□□□□ -0.15
ATPAF1Q5TC12 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
ATPAF1Q5TC12 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC14.14□□□□□ -0.15
ATPAF1Q5TC12 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC14.14□□□□□ -0.15
ATPAF1Q5TC12 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ATPAF1Q5TC12 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
ATPAF1Q5TC12 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
ATPAF1Q5TC12 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC14.14□□□□□ -0.15
ATPAF1Q5TC12 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
ATPAF1Q5TC12 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
ATPAF1Q5TC12 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
ATPAF1Q5TC12 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
ATPAF1Q5TC12 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ATPAF1Q5TC12 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ATPAF1Q5TC12 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ATPAF1Q5TC12 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC14.14□□□□□ -0.15
ATPAF1Q5TC12 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC14.14□□□□□ -0.15
ATPAF1Q5TC12 FAM185BP-201ENST00000443595 716 ntBASIC14.14□□□□□ -0.15
ATPAF1Q5TC12 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms