Protein–RNA interactions for Protein: Q567U6

CCDC93, Coiled-coil domain-containing protein 93, humanhuman

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93Q567U6 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC19.78■□□□□ 0.76
CCDC93Q567U6 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
CCDC93Q567U6 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC93Q567U6 LINC01115-203ENST00000606068 577 ntBASIC19.78■□□□□ 0.76
CCDC93Q567U6 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC19.78■□□□□ 0.76
CCDC93Q567U6 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC93Q567U6 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC93Q567U6 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC93Q567U6 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC93Q567U6 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
CCDC93Q567U6 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC93Q567U6 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
CCDC93Q567U6 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
CCDC93Q567U6 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC93Q567U6 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC93Q567U6 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC19.77■□□□□ 0.76
CCDC93Q567U6 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC93Q567U6 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC93Q567U6 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC93Q567U6 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC93Q567U6 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC93Q567U6 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC93Q567U6 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC19.77■□□□□ 0.76
CCDC93Q567U6 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
CCDC93Q567U6 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC93Q567U6 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
CCDC93Q567U6 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC93Q567U6 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC93Q567U6 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC93Q567U6 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC19.77■□□□□ 0.76
CCDC93Q567U6 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC19.77■□□□□ 0.76
CCDC93Q567U6 AC099548.2-209ENST00000480264 625 ntBASIC19.77■□□□□ 0.76
CCDC93Q567U6 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC19.77■□□□□ 0.76
CCDC93Q567U6 AGER-214ENST00000538695 487 ntTSL 2 BASIC19.77■□□□□ 0.76
CCDC93Q567U6 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC19.77■□□□□ 0.76
CCDC93Q567U6 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC19.77■□□□□ 0.76
CCDC93Q567U6 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC19.77■□□□□ 0.76
CCDC93Q567U6 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC93Q567U6 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC19.77■□□□□ 0.76
CCDC93Q567U6 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC93Q567U6 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
CCDC93Q567U6 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC19.77■□□□□ 0.76
CCDC93Q567U6 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC19.77■□□□□ 0.76
CCDC93Q567U6 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC93Q567U6 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC93Q567U6 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC93Q567U6 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC19.77■□□□□ 0.76
CCDC93Q567U6 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
CCDC93Q567U6 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
CCDC93Q567U6 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
CCDC93Q567U6 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
CCDC93Q567U6 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
CCDC93Q567U6 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC19.77■□□□□ 0.75
CCDC93Q567U6 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
CCDC93Q567U6 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.75
CCDC93Q567U6 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC93Q567U6 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC93Q567U6 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC93Q567U6 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC93Q567U6 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC19.76■□□□□ 0.75
CCDC93Q567U6 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC93Q567U6 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
CCDC93Q567U6 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC93Q567U6 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC19.76■□□□□ 0.75
CCDC93Q567U6 RPL7P3-201ENST00000441388 714 ntBASIC19.76■□□□□ 0.75
CCDC93Q567U6 BCRP2-202ENST00000447763 634 ntBASIC19.76■□□□□ 0.75
CCDC93Q567U6 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC19.76■□□□□ 0.75
CCDC93Q567U6 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC19.76■□□□□ 0.75
CCDC93Q567U6 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC93Q567U6 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC93Q567U6 AC108725.1-201ENST00000495472 409 ntBASIC19.76■□□□□ 0.75
CCDC93Q567U6 BCRP6-201ENST00000510112 632 ntBASIC19.76■□□□□ 0.75
CCDC93Q567U6 BCRP7-201ENST00000511549 544 ntBASIC19.76■□□□□ 0.75
CCDC93Q567U6 PARP8-218ENST00000513738 596 ntTSL 4 BASIC19.76■□□□□ 0.75
CCDC93Q567U6 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC19.76■□□□□ 0.75
CCDC93Q567U6 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
CCDC93Q567U6 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC19.76■□□□□ 0.75
CCDC93Q567U6 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
CCDC93Q567U6 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC19.76■□□□□ 0.75
CCDC93Q567U6 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC93Q567U6 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
CCDC93Q567U6 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC93Q567U6 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC93Q567U6 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC93Q567U6 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC93Q567U6 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC19.76■□□□□ 0.75
CCDC93Q567U6 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC19.75■□□□□ 0.75
CCDC93Q567U6 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC93Q567U6 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
CCDC93Q567U6 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC93Q567U6 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC93Q567U6 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC93Q567U6 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
CCDC93Q567U6 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC19.75■□□□□ 0.75
CCDC93Q567U6 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC93Q567U6 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC93Q567U6 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC93Q567U6 MGST3-203ENST00000367885 680 ntTSL 2 BASIC19.75■□□□□ 0.75
CCDC93Q567U6 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC19.75■□□□□ 0.75
CCDC93Q567U6 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms