Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC15.67■□□□□ 0.1
PCDH1Q08174 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
PCDH1Q08174 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC15.67■□□□□ 0.1
PCDH1Q08174 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PCDH1Q08174 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PCDH1Q08174 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PCDH1Q08174 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC15.67■□□□□ 0.1
PCDH1Q08174 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PCDH1Q08174 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PCDH1Q08174 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PCDH1Q08174 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC15.67■□□□□ 0.1
PCDH1Q08174 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
PCDH1Q08174 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC15.67■□□□□ 0.1
PCDH1Q08174 ACE-203ENST00000413513 2237 ntTSL 2 BASIC15.67■□□□□ 0.1
PCDH1Q08174 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC15.67■□□□□ 0.1
PCDH1Q08174 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PCDH1Q08174 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PCDH1Q08174 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PCDH1Q08174 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC15.67■□□□□ 0.1
PCDH1Q08174 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
PCDH1Q08174 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PCDH1Q08174 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC15.67■□□□□ 0.1
PCDH1Q08174 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
PCDH1Q08174 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
PCDH1Q08174 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PCDH1Q08174 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PCDH1Q08174 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PCDH1Q08174 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PCDH1Q08174 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PCDH1Q08174 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC15.66■□□□□ 0.1
PCDH1Q08174 SUPT20HL2-201ENST00000486479 2409 ntBASIC15.66■□□□□ 0.1
PCDH1Q08174 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PCDH1Q08174 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC15.66■□□□□ 0.1
PCDH1Q08174 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC15.66■□□□□ 0.1
PCDH1Q08174 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC15.66■□□□□ 0.1
PCDH1Q08174 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PCDH1Q08174 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC15.66■□□□□ 0.1
PCDH1Q08174 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PCDH1Q08174 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC15.66■□□□□ 0.1
PCDH1Q08174 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC15.66■□□□□ 0.1
PCDH1Q08174 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
PCDH1Q08174 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PCDH1Q08174 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PCDH1Q08174 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PCDH1Q08174 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
PCDH1Q08174 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC15.66■□□□□ 0.1
PCDH1Q08174 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PCDH1Q08174 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC15.66■□□□□ 0.1
PCDH1Q08174 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC15.66■□□□□ 0.1
PCDH1Q08174 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC15.66■□□□□ 0.1
PCDH1Q08174 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC15.66■□□□□ 0.1
PCDH1Q08174 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC15.66■□□□□ 0.1
PCDH1Q08174 AC027307.2-201ENST00000591252 911 ntBASIC15.66■□□□□ 0.1
PCDH1Q08174 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC15.66■□□□□ 0.1
PCDH1Q08174 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
PCDH1Q08174 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC15.66■□□□□ 0.1
PCDH1Q08174 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC15.66■□□□□ 0.1
PCDH1Q08174 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC15.66■□□□□ 0.1
PCDH1Q08174 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PCDH1Q08174 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PCDH1Q08174 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PCDH1Q08174 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PCDH1Q08174 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PCDH1Q08174 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
PCDH1Q08174 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
PCDH1Q08174 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
PCDH1Q08174 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC15.66■□□□□ 0.1
PCDH1Q08174 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PCDH1Q08174 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PCDH1Q08174 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PCDH1Q08174 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC15.66■□□□□ 0.1
PCDH1Q08174 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PCDH1Q08174 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
PCDH1Q08174 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PCDH1Q08174 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PCDH1Q08174 AP001282.1-201ENST00000531301 1499 ntBASIC15.65■□□□□ 0.1
PCDH1Q08174 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
PCDH1Q08174 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PCDH1Q08174 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC15.65■□□□□ 0.1
PCDH1Q08174 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
PCDH1Q08174 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
PCDH1Q08174 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PCDH1Q08174 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC15.65■□□□□ 0.1
PCDH1Q08174 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PCDH1Q08174 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
PCDH1Q08174 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC15.65■□□□□ 0.1
PCDH1Q08174 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PCDH1Q08174 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PCDH1Q08174 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
PCDH1Q08174 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
PCDH1Q08174 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC15.65■□□□□ 0.1
PCDH1Q08174 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PCDH1Q08174 FAM220BP-201ENST00000377689 816 ntBASIC15.65■□□□□ 0.1
PCDH1Q08174 YBX2P1-201ENST00000394192 760 ntBASIC15.65■□□□□ 0.1
PCDH1Q08174 MIR940-201ENST00000401276 94 ntBASIC15.65■□□□□ 0.1
PCDH1Q08174 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC15.65■□□□□ 0.1
PCDH1Q08174 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC15.65■□□□□ 0.1
PCDH1Q08174 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
PCDH1Q08174 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC15.65■□□□□ 0.1
PCDH1Q08174 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC15.65■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms