Protein–RNA interactions for Protein: Q07092

COL16A1, Collagen alpha-1(XVI) chain, humanhuman

Predicted RBP Predictions only

Length 1,604 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1Q07092 AC141586.1-203ENST00000567242 366 ntBASIC21.31■■□□□ 1
COL16A1Q07092 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
COL16A1Q07092 CASP16P-204ENST00000635032 809 ntBASIC21.31■■□□□ 1
COL16A1Q07092 AMT-206ENST00000458307 1860 ntTSL 2 BASIC21.31■■□□□ 1
COL16A1Q07092 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
COL16A1Q07092 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC21.31■■□□□ 1
COL16A1Q07092 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC21.31■■□□□ 1
COL16A1Q07092 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC21.31■■□□□ 1
COL16A1Q07092 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC21.31■■□□□ 1
COL16A1Q07092 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC21.31■■□□□ 1
COL16A1Q07092 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC21.3■■□□□ 1
COL16A1Q07092 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC21.3■■□□□ 1
COL16A1Q07092 AL590617.2-201ENST00000432673 917 ntTSL 3 BASIC21.3■■□□□ 1
COL16A1Q07092 TCERG1L-AS1-201ENST00000436942 472 ntTSL 2 BASIC21.3■■□□□ 1
COL16A1Q07092 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC21.3■■□□□ 1
COL16A1Q07092 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC21.3■■□□□ 1
COL16A1Q07092 PPOX-204ENST00000462866 473 ntTSL 5 BASIC21.3■■□□□ 1
COL16A1Q07092 PPP2R1A-209ENST00000477989 444 ntTSL 3 BASIC21.3■■□□□ 1
COL16A1Q07092 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC21.3■■□□□ 1
COL16A1Q07092 TMEM220-AS1-207ENST00000584714 541 ntTSL 4 BASIC21.3■■□□□ 1
COL16A1Q07092 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC21.3■■□□□ 1
COL16A1Q07092 AC132192.2-201ENST00000596206 1147 ntBASIC21.3■■□□□ 1
COL16A1Q07092 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC21.3■■□□□ 1
COL16A1Q07092 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC21.3■■□□□ 1
COL16A1Q07092 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
COL16A1Q07092 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC21.3■■□□□ 1
COL16A1Q07092 GNE-204ENST00000539208 2190 ntTSL 2 BASIC21.3■■□□□ 1
COL16A1Q07092 PIGC-201ENST00000344529 1447 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
COL16A1Q07092 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
COL16A1Q07092 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC21.3■■□□□ 1
COL16A1Q07092 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC21.3■■□□□ 1
COL16A1Q07092 NTF3-202ENST00000423158 1336 ntAPPRIS ALT1 TSL 1 (best) BASIC21.3■■□□□ 1
COL16A1Q07092 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC21.3■■□□□ 1
COL16A1Q07092 PDE6G-201ENST00000331056 1029 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
COL16A1Q07092 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
COL16A1Q07092 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
COL16A1Q07092 MIR1227-201ENST00000408484 88 ntBASIC21.29■■□□□ 1
COL16A1Q07092 VEGFB-202ENST00000426086 979 ntAPPRIS ALT1 TSL 1 (best) BASIC21.29■■□□□ 1
COL16A1Q07092 AC012618.1-201ENST00000461223 412 ntBASIC21.29■■□□□ 1
COL16A1Q07092 AC246817.2-203ENST00000517357 569 ntTSL 4 BASIC21.29■■□□□ 1
COL16A1Q07092 AC246817.2-202ENST00000519393 564 ntTSL 4 BASIC21.29■■□□□ 1
COL16A1Q07092 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC21.29■■□□□ 1
COL16A1Q07092 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC21.29■■□□□ 1
COL16A1Q07092 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC21.29■■□□□ 1
COL16A1Q07092 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC21.29■■□□□ 1
COL16A1Q07092 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
COL16A1Q07092 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC21.29■■□□□ 1
COL16A1Q07092 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC21.29■■□□□ 1
COL16A1Q07092 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
COL16A1Q07092 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC21.29■■□□□ 1
COL16A1Q07092 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC21.29■■□□□ 1
COL16A1Q07092 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
COL16A1Q07092 ZDHHC4-204ENST00000396709 1485 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
COL16A1Q07092 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
COL16A1Q07092 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
COL16A1Q07092 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC21.29■■□□□ 1
COL16A1Q07092 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
COL16A1Q07092 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC21.29■■□□□ 1
COL16A1Q07092 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
COL16A1Q07092 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC21.29■■□□□ 1
COL16A1Q07092 TCEAL6-201ENST00000372773 983 ntAPPRIS P1 TSL 3 BASIC21.29■■□□□ 1
COL16A1Q07092 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC21.29■■□□□ 1
COL16A1Q07092 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC21.29■■□□□ 1
COL16A1Q07092 CMC2-214ENST00000565925 640 ntTSL 5 BASIC21.29■■□□□ 1
COL16A1Q07092 CENPX-208ENST00000584347 799 ntTSL 2 BASIC21.29■■□□□ 1
COL16A1Q07092 ZNF528-AS1-202ENST00000596746 929 ntTSL 5 BASIC21.29■■□□□ 1
COL16A1Q07092 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC21.29■■□□□ 1
COL16A1Q07092 AC097359.3-201ENST00000603982 1210 ntBASIC21.29■■□□□ 1
COL16A1Q07092 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
COL16A1Q07092 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
COL16A1Q07092 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC21.28■■□□□ 1
COL16A1Q07092 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC21.28■■□□□ 1
COL16A1Q07092 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC21.28■■□□□ 1
COL16A1Q07092 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC21.28■■□□□ 1
COL16A1Q07092 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC21.28■■□□□ 1
COL16A1Q07092 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC21.28■■□□□ 1
COL16A1Q07092 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
COL16A1Q07092 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
COL16A1Q07092 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
COL16A1Q07092 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC21.28■■□□□ 1
COL16A1Q07092 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
COL16A1Q07092 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
COL16A1Q07092 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC21.28■■□□□ 1
COL16A1Q07092 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC21.28■■□□□ 1
COL16A1Q07092 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC21.28■■□□□ 1
COL16A1Q07092 GGT3P-204ENST00000453783 1664 ntBASIC21.28■■□□□ 1
COL16A1Q07092 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC21.28■■□□□ 1
COL16A1Q07092 TRO-205ENST00000399736 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
COL16A1Q07092 SLC16A6P1-201ENST00000413214 1059 ntBASIC21.28■■□□□ 1
COL16A1Q07092 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC21.28■■□□□ 1
COL16A1Q07092 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
COL16A1Q07092 FBXO24-204ENST00000465843 957 ntTSL 1 (best) BASIC21.28■■□□□ 1
COL16A1Q07092 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC21.28■■□□□ 1
COL16A1Q07092 RN7SL713P-201ENST00000582127 302 ntBASIC21.28■■□□□ 1
COL16A1Q07092 AP001065.2-201ENST00000617205 644 ntBASIC21.28■■□□□ 1
COL16A1Q07092 SRSF3-208ENST00000620941 869 ntAPPRIS P1 TSL 3 BASIC21.28■■□□□ 1
COL16A1Q07092 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
COL16A1Q07092 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
COL16A1Q07092 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC21.28■■□□□ 1
COL16A1Q07092 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC21.28■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms