Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
UBA52P62987 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
UBA52P62987 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC14.1□□□□□ -0.15
UBA52P62987 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
UBA52P62987 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC14.1□□□□□ -0.15
UBA52P62987 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
UBA52P62987 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC14.1□□□□□ -0.15
UBA52P62987 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC14.1□□□□□ -0.15
UBA52P62987 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
UBA52P62987 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC14.1□□□□□ -0.15
UBA52P62987 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
UBA52P62987 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC14.1□□□□□ -0.15
UBA52P62987 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
UBA52P62987 AC013268.4-201ENST00000637413 2228 ntBASIC14.1□□□□□ -0.15
UBA52P62987 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
UBA52P62987 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
UBA52P62987 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
UBA52P62987 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC14.1□□□□□ -0.15
UBA52P62987 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
UBA52P62987 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC14.09□□□□□ -0.15
UBA52P62987 AC002310.6-201ENST00000624451 1377 ntBASIC14.09□□□□□ -0.15
UBA52P62987 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
UBA52P62987 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC14.09□□□□□ -0.15
UBA52P62987 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
UBA52P62987 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
UBA52P62987 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
UBA52P62987 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC14.09□□□□□ -0.15
UBA52P62987 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC14.09□□□□□ -0.15
UBA52P62987 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
UBA52P62987 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC14.09□□□□□ -0.15
UBA52P62987 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC14.09□□□□□ -0.15
UBA52P62987 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
UBA52P62987 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC14.09□□□□□ -0.15
UBA52P62987 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC14.09□□□□□ -0.15
UBA52P62987 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC14.09□□□□□ -0.15
UBA52P62987 NKTR-203ENST00000442970 646 ntTSL 2 BASIC14.09□□□□□ -0.15
UBA52P62987 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC14.09□□□□□ -0.15
UBA52P62987 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
UBA52P62987 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
UBA52P62987 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
UBA52P62987 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC14.09□□□□□ -0.15
UBA52P62987 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC14.09□□□□□ -0.15
UBA52P62987 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC14.09□□□□□ -0.15
UBA52P62987 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC14.09□□□□□ -0.15
UBA52P62987 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
UBA52P62987 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC14.09□□□□□ -0.15
UBA52P62987 COX5A-206ENST00000568783 571 ntTSL 3 BASIC14.09□□□□□ -0.15
UBA52P62987 LINC02084-201ENST00000606069 1096 ntBASIC14.09□□□□□ -0.15
UBA52P62987 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC14.09□□□□□ -0.15
UBA52P62987 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
UBA52P62987 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
UBA52P62987 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
UBA52P62987 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC14.09□□□□□ -0.15
UBA52P62987 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
UBA52P62987 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
UBA52P62987 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
UBA52P62987 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC14.09□□□□□ -0.15
UBA52P62987 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC14.09□□□□□ -0.15
UBA52P62987 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
UBA52P62987 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
UBA52P62987 ALOX12P2-203ENST00000570921 1945 ntBASIC14.09□□□□□ -0.15
UBA52P62987 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC14.09□□□□□ -0.15
UBA52P62987 KRT18P28-201ENST00000453838 1332 ntBASIC14.09□□□□□ -0.15
UBA52P62987 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
UBA52P62987 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC14.09□□□□□ -0.15
UBA52P62987 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
UBA52P62987 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC14.09□□□□□ -0.15
UBA52P62987 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
UBA52P62987 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
UBA52P62987 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
UBA52P62987 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
UBA52P62987 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
UBA52P62987 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC14.09□□□□□ -0.15
UBA52P62987 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC14.09□□□□□ -0.15
UBA52P62987 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
UBA52P62987 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
UBA52P62987 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC14.09□□□□□ -0.15
UBA52P62987 SBF1P1-201ENST00000444527 5631 ntBASIC14.09□□□□□ -0.15
UBA52P62987 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
UBA52P62987 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
UBA52P62987 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
UBA52P62987 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC14.08□□□□□ -0.15
UBA52P62987 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
UBA52P62987 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC14.08□□□□□ -0.16
UBA52P62987 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.16
UBA52P62987 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
UBA52P62987 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC14.08□□□□□ -0.16
UBA52P62987 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
UBA52P62987 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
UBA52P62987 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
UBA52P62987 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
UBA52P62987 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
UBA52P62987 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
UBA52P62987 CRYGEP-201ENST00000412192 528 ntBASIC14.08□□□□□ -0.16
UBA52P62987 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC14.08□□□□□ -0.16
UBA52P62987 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC14.08□□□□□ -0.16
UBA52P62987 METTL21AP1-201ENST00000438852 635 ntBASIC14.08□□□□□ -0.16
UBA52P62987 KRT18P2-201ENST00000447938 1258 ntBASIC14.08□□□□□ -0.16
UBA52P62987 SNHG9-202ENST00000564014 471 ntBASIC14.08□□□□□ -0.16
UBA52P62987 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC14.08□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms