Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
GFRA1P56159 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC14.48□□□□□ -0.09
GFRA1P56159 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
GFRA1P56159 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
GFRA1P56159 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
GFRA1P56159 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC14.48□□□□□ -0.09
GFRA1P56159 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
GFRA1P56159 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC14.48□□□□□ -0.09
GFRA1P56159 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC14.48□□□□□ -0.09
GFRA1P56159 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC14.48□□□□□ -0.09
GFRA1P56159 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC14.48□□□□□ -0.09
GFRA1P56159 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC14.48□□□□□ -0.09
GFRA1P56159 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC14.48□□□□□ -0.09
GFRA1P56159 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC14.48□□□□□ -0.09
GFRA1P56159 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
GFRA1P56159 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
GFRA1P56159 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
GFRA1P56159 FO393414.2-201ENST00000405153 598 ntBASIC14.48□□□□□ -0.09
GFRA1P56159 HAUS4P1-201ENST00000406739 1145 ntBASIC14.48□□□□□ -0.09
GFRA1P56159 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
GFRA1P56159 AC002472.2-201ENST00000442739 958 ntBASIC14.48□□□□□ -0.09
GFRA1P56159 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
GFRA1P56159 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC14.48□□□□□ -0.09
GFRA1P56159 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC14.48□□□□□ -0.09
GFRA1P56159 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC14.48□□□□□ -0.09
GFRA1P56159 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC14.48□□□□□ -0.09
GFRA1P56159 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
GFRA1P56159 PRR29-204ENST00000577953 565 ntTSL 4 BASIC14.48□□□□□ -0.09
GFRA1P56159 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC14.48□□□□□ -0.09
GFRA1P56159 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
GFRA1P56159 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
GFRA1P56159 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC14.48□□□□□ -0.09
GFRA1P56159 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
GFRA1P56159 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
GFRA1P56159 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
GFRA1P56159 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
GFRA1P56159 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
GFRA1P56159 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC14.48□□□□□ -0.09
GFRA1P56159 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
GFRA1P56159 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC14.47□□□□□ -0.09
GFRA1P56159 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
GFRA1P56159 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
GFRA1P56159 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
GFRA1P56159 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC14.47□□□□□ -0.09
GFRA1P56159 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
GFRA1P56159 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
GFRA1P56159 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
GFRA1P56159 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC14.47□□□□□ -0.09
GFRA1P56159 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC14.47□□□□□ -0.09
GFRA1P56159 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC14.47□□□□□ -0.09
GFRA1P56159 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
GFRA1P56159 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
GFRA1P56159 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
GFRA1P56159 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
GFRA1P56159 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC14.47□□□□□ -0.09
GFRA1P56159 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC14.47□□□□□ -0.09
GFRA1P56159 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC14.47□□□□□ -0.09
GFRA1P56159 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC14.47□□□□□ -0.09
GFRA1P56159 AP001282.1-201ENST00000531301 1499 ntBASIC14.47□□□□□ -0.09
GFRA1P56159 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC14.47□□□□□ -0.09
GFRA1P56159 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC14.47□□□□□ -0.09
GFRA1P56159 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
GFRA1P56159 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
GFRA1P56159 AC236430.1-201ENST00000402231 743 ntBASIC14.47□□□□□ -0.09
GFRA1P56159 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC14.47□□□□□ -0.09
GFRA1P56159 HIST3H2BA-201ENST00000436555 524 ntBASIC14.47□□□□□ -0.09
GFRA1P56159 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC14.47□□□□□ -0.09
GFRA1P56159 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
GFRA1P56159 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC14.47□□□□□ -0.09
GFRA1P56159 AC008738.7-201ENST00000609744 511 ntBASIC14.47□□□□□ -0.09
GFRA1P56159 MIR6069-201ENST00000620069 79 ntBASIC14.47□□□□□ -0.09
GFRA1P56159 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC14.47□□□□□ -0.09
GFRA1P56159 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC14.47□□□□□ -0.09
GFRA1P56159 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
GFRA1P56159 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC14.47□□□□□ -0.09
GFRA1P56159 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
GFRA1P56159 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
GFRA1P56159 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
GFRA1P56159 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
GFRA1P56159 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
GFRA1P56159 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
GFRA1P56159 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC14.47□□□□□ -0.09
GFRA1P56159 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC14.47□□□□□ -0.09
GFRA1P56159 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
GFRA1P56159 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
GFRA1P56159 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
GFRA1P56159 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
GFRA1P56159 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC14.47□□□□□ -0.09
GFRA1P56159 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
GFRA1P56159 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC14.46□□□□□ -0.09
GFRA1P56159 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
GFRA1P56159 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
GFRA1P56159 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
GFRA1P56159 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
GFRA1P56159 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
GFRA1P56159 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
GFRA1P56159 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
GFRA1P56159 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC14.46□□□□□ -0.09
GFRA1P56159 BTBD7P1-201ENST00000447253 1453 ntBASIC14.46□□□□□ -0.09
GFRA1P56159 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms