Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC17.39■□□□□ 0.38
VCPP55072 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
VCPP55072 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC17.39■□□□□ 0.37
VCPP55072 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC17.39■□□□□ 0.37
VCPP55072 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC17.39■□□□□ 0.37
VCPP55072 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC17.39■□□□□ 0.37
VCPP55072 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC17.39■□□□□ 0.37
VCPP55072 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
VCPP55072 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC17.39■□□□□ 0.37
VCPP55072 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
VCPP55072 LINC02199-201ENST00000506655 2702 ntBASIC17.39■□□□□ 0.37
VCPP55072 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC17.39■□□□□ 0.37
VCPP55072 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.37
VCPP55072 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
VCPP55072 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
VCPP55072 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
VCPP55072 SPTLC1P1-201ENST00000447199 261 ntBASIC17.39■□□□□ 0.37
VCPP55072 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC17.39■□□□□ 0.37
VCPP55072 TMPRSS11CP-201ENST00000453277 683 ntBASIC17.39■□□□□ 0.37
VCPP55072 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC17.39■□□□□ 0.37
VCPP55072 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC17.39■□□□□ 0.37
VCPP55072 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
VCPP55072 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC17.39■□□□□ 0.37
VCPP55072 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
VCPP55072 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC17.39■□□□□ 0.37
VCPP55072 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC17.39■□□□□ 0.37
VCPP55072 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
VCPP55072 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
VCPP55072 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
VCPP55072 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
VCPP55072 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
VCPP55072 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
VCPP55072 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
VCPP55072 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC17.38■□□□□ 0.37
VCPP55072 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
VCPP55072 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC17.38■□□□□ 0.37
VCPP55072 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
VCPP55072 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC17.38■□□□□ 0.37
VCPP55072 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC17.38■□□□□ 0.37
VCPP55072 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC17.38■□□□□ 0.37
VCPP55072 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
VCPP55072 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
VCPP55072 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC17.38■□□□□ 0.37
VCPP55072 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
VCPP55072 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC17.38■□□□□ 0.37
VCPP55072 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC17.38■□□□□ 0.37
VCPP55072 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
VCPP55072 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC17.38■□□□□ 0.37
VCPP55072 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC17.38■□□□□ 0.37
VCPP55072 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC17.38■□□□□ 0.37
VCPP55072 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
VCPP55072 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
VCPP55072 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
VCPP55072 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
VCPP55072 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC17.38■□□□□ 0.37
VCPP55072 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC17.38■□□□□ 0.37
VCPP55072 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC17.38■□□□□ 0.37
VCPP55072 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
VCPP55072 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC17.38■□□□□ 0.37
VCPP55072 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
VCPP55072 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
VCPP55072 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
VCPP55072 AC100757.3-201ENST00000622361 1406 ntBASIC17.38■□□□□ 0.37
VCPP55072 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
VCPP55072 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
VCPP55072 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
VCPP55072 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
VCPP55072 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC17.37■□□□□ 0.37
VCPP55072 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
VCPP55072 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
VCPP55072 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
VCPP55072 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
VCPP55072 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
VCPP55072 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
VCPP55072 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC17.37■□□□□ 0.37
VCPP55072 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
VCPP55072 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
VCPP55072 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
VCPP55072 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
VCPP55072 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
VCPP55072 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
VCPP55072 AC005052.1-201ENST00000625181 2492 ntBASIC17.37■□□□□ 0.37
VCPP55072 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
VCPP55072 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
VCPP55072 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
VCPP55072 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
VCPP55072 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC17.37■□□□□ 0.37
VCPP55072 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
VCPP55072 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
VCPP55072 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
VCPP55072 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC17.37■□□□□ 0.37
VCPP55072 TSSK5P-201ENST00000423978 907 ntBASIC17.37■□□□□ 0.37
VCPP55072 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC17.37■□□□□ 0.37
VCPP55072 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC17.37■□□□□ 0.37
VCPP55072 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
VCPP55072 GIMAP3P-201ENST00000495150 836 ntBASIC17.37■□□□□ 0.37
VCPP55072 CDK4-206ENST00000549606 558 ntTSL 2 BASIC17.37■□□□□ 0.37
VCPP55072 KRT8P23-201ENST00000560090 1207 ntBASIC17.37■□□□□ 0.37
VCPP55072 ARL16-202ENST00000570561 768 ntTSL 2 BASIC17.37■□□□□ 0.37
VCPP55072 SSH2-210ENST00000582084 560 ntTSL 3 BASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms