Protein–RNA interactions for Protein: P52926

HMGA2, High mobility group protein HMGI-C, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2P52926 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
HMGA2P52926 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC14.8□□□□□ -0.04
HMGA2P52926 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC14.8□□□□□ -0.04
HMGA2P52926 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HMGA2P52926 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
HMGA2P52926 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC14.8□□□□□ -0.04
HMGA2P52926 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC14.8□□□□□ -0.04
HMGA2P52926 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
HMGA2P52926 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC14.8□□□□□ -0.04
HMGA2P52926 DDT-204ENST00000404092 805 ntTSL 3 BASIC14.8□□□□□ -0.04
HMGA2P52926 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
HMGA2P52926 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
HMGA2P52926 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC14.8□□□□□ -0.04
HMGA2P52926 POLD4-207ENST00000531239 584 ntTSL 2 BASIC14.8□□□□□ -0.04
HMGA2P52926 QPRT-203ENST00000562473 579 ntTSL 3 BASIC14.8□□□□□ -0.04
HMGA2P52926 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC14.8□□□□□ -0.04
HMGA2P52926 PRELID1P1-202ENST00000567272 903 ntBASIC14.8□□□□□ -0.04
HMGA2P52926 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
HMGA2P52926 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
HMGA2P52926 AL009183.1-201ENST00000603760 355 ntBASIC14.8□□□□□ -0.04
HMGA2P52926 AL078644.1-201ENST00000609881 752 ntBASIC14.8□□□□□ -0.04
HMGA2P52926 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
HMGA2P52926 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
HMGA2P52926 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HMGA2P52926 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC14.8□□□□□ -0.04
HMGA2P52926 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
HMGA2P52926 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
HMGA2P52926 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HMGA2P52926 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC14.8□□□□□ -0.04
HMGA2P52926 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
HMGA2P52926 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HMGA2P52926 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC14.8□□□□□ -0.04
HMGA2P52926 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC14.8□□□□□ -0.04
HMGA2P52926 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
HMGA2P52926 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
HMGA2P52926 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
HMGA2P52926 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC14.8□□□□□ -0.04
HMGA2P52926 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
HMGA2P52926 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HMGA2P52926 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
HMGA2P52926 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
HMGA2P52926 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
HMGA2P52926 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HMGA2P52926 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
HMGA2P52926 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
HMGA2P52926 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
HMGA2P52926 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
HMGA2P52926 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
HMGA2P52926 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
HMGA2P52926 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
HMGA2P52926 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
HMGA2P52926 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
HMGA2P52926 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
HMGA2P52926 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
HMGA2P52926 RPS2P28-201ENST00000314255 741 ntBASIC14.79□□□□□ -0.04
HMGA2P52926 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
HMGA2P52926 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
HMGA2P52926 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
HMGA2P52926 MECR-202ENST00000373791 2416 ntTSL 2 BASIC14.79□□□□□ -0.04
HMGA2P52926 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
HMGA2P52926 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC14.79□□□□□ -0.04
HMGA2P52926 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
HMGA2P52926 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
HMGA2P52926 CENPM-204ENST00000402420 688 ntTSL 5 BASIC14.79□□□□□ -0.04
HMGA2P52926 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
HMGA2P52926 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
HMGA2P52926 UPK3BP1-201ENST00000428678 509 ntBASIC14.79□□□□□ -0.04
HMGA2P52926 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
HMGA2P52926 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC14.79□□□□□ -0.04
HMGA2P52926 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
HMGA2P52926 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
HMGA2P52926 MOK-208ENST00000519058 917 ntTSL 2 BASIC14.79□□□□□ -0.04
HMGA2P52926 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
HMGA2P52926 BMF-207ENST00000559701 630 ntTSL 3 BASIC14.79□□□□□ -0.04
HMGA2P52926 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
HMGA2P52926 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC14.79□□□□□ -0.04
HMGA2P52926 AL445228.2-201ENST00000605589 952 ntBASIC14.79□□□□□ -0.04
HMGA2P52926 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
HMGA2P52926 AC073439.1-201ENST00000624121 1774 ntBASIC14.79□□□□□ -0.04
HMGA2P52926 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
HMGA2P52926 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
HMGA2P52926 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
HMGA2P52926 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
HMGA2P52926 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
HMGA2P52926 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC14.78□□□□□ -0.04
HMGA2P52926 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
HMGA2P52926 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HMGA2P52926 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
HMGA2P52926 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC14.78□□□□□ -0.04
HMGA2P52926 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC14.78□□□□□ -0.04
HMGA2P52926 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
HMGA2P52926 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC14.78□□□□□ -0.04
HMGA2P52926 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HMGA2P52926 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
HMGA2P52926 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
HMGA2P52926 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC14.78□□□□□ -0.04
HMGA2P52926 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HMGA2P52926 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HMGA2P52926 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC14.78□□□□□ -0.04
HMGA2P52926 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms