Protein–RNA interactions for Protein: P31327

CPS1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, humanhuman

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1P31327 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC22.47■■□□□ 1.19
CPS1P31327 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC22.47■■□□□ 1.19
CPS1P31327 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
CPS1P31327 AC005622.1-201ENST00000636801 1703 ntBASIC22.47■■□□□ 1.19
CPS1P31327 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
CPS1P31327 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC22.47■■□□□ 1.19
CPS1P31327 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
CPS1P31327 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC22.47■■□□□ 1.19
CPS1P31327 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
CPS1P31327 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
CPS1P31327 TOMM22P5-201ENST00000416399 439 ntBASIC22.47■■□□□ 1.19
CPS1P31327 FAM197Y7-201ENST00000432892 766 ntBASIC22.47■■□□□ 1.19
CPS1P31327 POM121L10P-201ENST00000436994 1285 ntBASIC22.47■■□□□ 1.19
CPS1P31327 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC22.47■■□□□ 1.19
CPS1P31327 AC025165.3-201ENST00000471530 679 ntTSL 5 BASIC22.47■■□□□ 1.19
CPS1P31327 PRKXP1-201ENST00000561423 1122 ntBASIC22.47■■□□□ 1.19
CPS1P31327 RN7SL555P-201ENST00000584742 339 ntBASIC22.47■■□□□ 1.19
CPS1P31327 NKG7-204ENST00000595217 816 ntTSL 2 BASIC22.47■■□□□ 1.19
CPS1P31327 AC138649.2-201ENST00000615886 705 ntBASIC22.47■■□□□ 1.19
CPS1P31327 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
CPS1P31327 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC22.47■■□□□ 1.19
CPS1P31327 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
CPS1P31327 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
CPS1P31327 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC22.46■■□□□ 1.19
CPS1P31327 AGER-206ENST00000375070 1463 ntTSL 5 BASIC22.46■■□□□ 1.19
CPS1P31327 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
CPS1P31327 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC22.46■■□□□ 1.19
CPS1P31327 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
CPS1P31327 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
CPS1P31327 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC22.46■■□□□ 1.19
CPS1P31327 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
CPS1P31327 MIR769-201ENST00000390225 118 ntBASIC22.46■■□□□ 1.19
CPS1P31327 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
CPS1P31327 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC22.46■■□□□ 1.19
CPS1P31327 AC016700.1-201ENST00000429424 312 ntBASIC22.46■■□□□ 1.19
CPS1P31327 TARDBPP1-201ENST00000442013 1203 ntBASIC22.46■■□□□ 1.19
CPS1P31327 HSPB1P2-201ENST00000448722 546 ntBASIC22.46■■□□□ 1.19
CPS1P31327 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
CPS1P31327 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC22.46■■□□□ 1.19
CPS1P31327 IQSEC3P1-201ENST00000538799 536 ntBASIC22.46■■□□□ 1.19
CPS1P31327 MIR3907-201ENST00000579424 151 ntBASIC22.46■■□□□ 1.19
CPS1P31327 CYGB-203ENST00000589145 788 ntTSL 3 BASIC22.46■■□□□ 1.19
CPS1P31327 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC22.46■■□□□ 1.19
CPS1P31327 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC22.46■■□□□ 1.19
CPS1P31327 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
CPS1P31327 DNASE1L2-204ENST00000567494 1301 ntTSL 1 (best) BASIC22.45■■□□□ 1.19
CPS1P31327 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.19
CPS1P31327 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
CPS1P31327 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC22.45■■□□□ 1.18
CPS1P31327 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
CPS1P31327 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC22.45■■□□□ 1.18
CPS1P31327 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC22.45■■□□□ 1.18
CPS1P31327 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
CPS1P31327 SNX21-203ENST00000372541 771 ntTSL 2 BASIC22.45■■□□□ 1.18
CPS1P31327 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
CPS1P31327 CYP46A4P-201ENST00000414953 267 ntBASIC22.45■■□□□ 1.18
CPS1P31327 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC22.45■■□□□ 1.18
CPS1P31327 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC22.45■■□□□ 1.18
CPS1P31327 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC22.45■■□□□ 1.18
CPS1P31327 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC22.45■■□□□ 1.18
CPS1P31327 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC22.45■■□□□ 1.18
CPS1P31327 AC078925.2-201ENST00000624013 1973 ntBASIC22.45■■□□□ 1.18
CPS1P31327 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC22.45■■□□□ 1.18
CPS1P31327 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC22.45■■□□□ 1.18
CPS1P31327 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC22.45■■□□□ 1.18
CPS1P31327 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC22.44■■□□□ 1.18
CPS1P31327 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC22.44■■□□□ 1.18
CPS1P31327 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.18
CPS1P31327 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC22.44■■□□□ 1.18
CPS1P31327 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
CPS1P31327 PON3-201ENST00000265627 1105 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
CPS1P31327 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC22.44■■□□□ 1.18
CPS1P31327 SDHD-202ENST00000525291 790 ntTSL 3 BASIC22.44■■□□□ 1.18
CPS1P31327 AC016044.1-201ENST00000560818 572 ntTSL 4 BASIC22.44■■□□□ 1.18
CPS1P31327 LINC01229-204ENST00000568751 720 ntTSL 3 BASIC22.44■■□□□ 1.18
CPS1P31327 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
CPS1P31327 CR589904.1-202ENST00000611154 660 ntTSL 5 BASIC22.44■■□□□ 1.18
CPS1P31327 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC22.44■■□□□ 1.18
CPS1P31327 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC22.44■■□□□ 1.18
CPS1P31327 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC22.44■■□□□ 1.18
CPS1P31327 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC22.44■■□□□ 1.18
CPS1P31327 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
CPS1P31327 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
CPS1P31327 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC22.44■■□□□ 1.18
CPS1P31327 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
CPS1P31327 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC22.43■■□□□ 1.18
CPS1P31327 SDCCAG3P2-201ENST00000326105 1023 ntBASIC22.43■■□□□ 1.18
CPS1P31327 AL133466.1-201ENST00000447582 150 ntBASIC22.43■■□□□ 1.18
CPS1P31327 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
CPS1P31327 AC134698.3-201ENST00000523880 214 ntBASIC22.43■■□□□ 1.18
CPS1P31327 CFL1-214ENST00000534769 758 ntTSL 2 BASIC22.43■■□□□ 1.18
CPS1P31327 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
CPS1P31327 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC22.43■■□□□ 1.18
CPS1P31327 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC22.43■■□□□ 1.18
CPS1P31327 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC22.43■■□□□ 1.18
CPS1P31327 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC22.43■■□□□ 1.18
CPS1P31327 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC22.43■■□□□ 1.18
CPS1P31327 AL592424.1-201ENST00000563624 1536 ntBASIC22.43■■□□□ 1.18
CPS1P31327 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
CPS1P31327 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms