Protein–RNA interactions for Protein: P30408

TM4SF1, Transmembrane 4 L6 family member 1, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1P30408 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
TM4SF1P30408 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC19.85■□□□□ 0.77
TM4SF1P30408 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC19.85■□□□□ 0.77
TM4SF1P30408 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
TM4SF1P30408 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
TM4SF1P30408 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC19.85■□□□□ 0.77
TM4SF1P30408 AC025279.2-201ENST00000569730 653 ntBASIC19.85■□□□□ 0.77
TM4SF1P30408 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
TM4SF1P30408 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
TM4SF1P30408 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC19.85■□□□□ 0.77
TM4SF1P30408 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
TM4SF1P30408 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TM4SF1P30408 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TM4SF1P30408 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
TM4SF1P30408 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TM4SF1P30408 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TM4SF1P30408 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TM4SF1P30408 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC19.85■□□□□ 0.77
TM4SF1P30408 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TM4SF1P30408 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
TM4SF1P30408 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TM4SF1P30408 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC19.84■□□□□ 0.77
TM4SF1P30408 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
TM4SF1P30408 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC19.84■□□□□ 0.77
TM4SF1P30408 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TM4SF1P30408 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC19.84■□□□□ 0.77
TM4SF1P30408 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TM4SF1P30408 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
TM4SF1P30408 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
TM4SF1P30408 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TM4SF1P30408 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TM4SF1P30408 TEX30-203ENST00000376022 828 ntTSL 2 BASIC19.84■□□□□ 0.77
TM4SF1P30408 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
TM4SF1P30408 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
TM4SF1P30408 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC19.84■□□□□ 0.77
TM4SF1P30408 PFN2-215ENST00000497148 743 ntTSL 4 BASIC19.84■□□□□ 0.77
TM4SF1P30408 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC19.84■□□□□ 0.77
TM4SF1P30408 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC19.84■□□□□ 0.77
TM4SF1P30408 AP001258.2-201ENST00000529891 490 ntBASIC19.84■□□□□ 0.77
TM4SF1P30408 AC023310.1-201ENST00000554836 735 ntBASIC19.84■□□□□ 0.77
TM4SF1P30408 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC19.84■□□□□ 0.77
TM4SF1P30408 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TM4SF1P30408 AL022328.3-201ENST00000607943 679 ntBASIC19.84■□□□□ 0.77
TM4SF1P30408 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC19.84■□□□□ 0.77
TM4SF1P30408 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
TM4SF1P30408 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
TM4SF1P30408 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC19.84■□□□□ 0.77
TM4SF1P30408 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC19.84■□□□□ 0.77
TM4SF1P30408 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TM4SF1P30408 UBALD1-205ENST00000590891 2641 ntBASIC19.84■□□□□ 0.77
TM4SF1P30408 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC19.84■□□□□ 0.77
TM4SF1P30408 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TM4SF1P30408 DRD5P1-201ENST00000456605 1438 ntBASIC19.84■□□□□ 0.77
TM4SF1P30408 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC19.84■□□□□ 0.77
TM4SF1P30408 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
TM4SF1P30408 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC19.83■□□□□ 0.77
TM4SF1P30408 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
TM4SF1P30408 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
TM4SF1P30408 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
TM4SF1P30408 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
TM4SF1P30408 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC19.83■□□□□ 0.77
TM4SF1P30408 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
TM4SF1P30408 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC19.83■□□□□ 0.77
TM4SF1P30408 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
TM4SF1P30408 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC19.83■□□□□ 0.77
TM4SF1P30408 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC19.83■□□□□ 0.77
TM4SF1P30408 IFT20-206ENST00000578122 834 ntTSL 2 BASIC19.83■□□□□ 0.77
TM4SF1P30408 IFT20-208ENST00000578985 831 ntTSL 3 BASIC19.83■□□□□ 0.77
TM4SF1P30408 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC19.83■□□□□ 0.77
TM4SF1P30408 KLK3-211ENST00000597483 810 ntTSL 2 BASIC19.83■□□□□ 0.77
TM4SF1P30408 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
TM4SF1P30408 AC097359.3-201ENST00000603982 1210 ntBASIC19.83■□□□□ 0.77
TM4SF1P30408 AC106872.11-201ENST00000605838 421 ntBASIC19.83■□□□□ 0.77
TM4SF1P30408 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC19.83■□□□□ 0.77
TM4SF1P30408 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC19.83■□□□□ 0.77
TM4SF1P30408 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
TM4SF1P30408 PRKN-211ENST00000615065 261 ntTSL 5 BASIC19.83■□□□□ 0.77
TM4SF1P30408 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
TM4SF1P30408 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
TM4SF1P30408 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
TM4SF1P30408 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC19.83■□□□□ 0.76
TM4SF1P30408 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC19.83■□□□□ 0.76
TM4SF1P30408 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
TM4SF1P30408 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC19.83■□□□□ 0.76
TM4SF1P30408 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
TM4SF1P30408 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
TM4SF1P30408 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
TM4SF1P30408 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
TM4SF1P30408 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC19.83■□□□□ 0.76
TM4SF1P30408 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
TM4SF1P30408 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC19.83■□□□□ 0.76
TM4SF1P30408 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC19.82■□□□□ 0.76
TM4SF1P30408 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC19.82■□□□□ 0.76
TM4SF1P30408 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC19.82■□□□□ 0.76
TM4SF1P30408 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC19.82■□□□□ 0.76
TM4SF1P30408 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC19.82■□□□□ 0.76
TM4SF1P30408 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
TM4SF1P30408 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TM4SF1P30408 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
TM4SF1P30408 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms