Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC14.93□□□□□ -0.02
SHC1P29353 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SHC1P29353 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC14.93□□□□□ -0.02
SHC1P29353 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC14.93□□□□□ -0.02
SHC1P29353 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC14.93□□□□□ -0.02
SHC1P29353 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
SHC1P29353 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
SHC1P29353 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
SHC1P29353 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SHC1P29353 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
SHC1P29353 AC144831.1-201ENST00000573312 2656 ntBASIC14.93□□□□□ -0.02
SHC1P29353 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SHC1P29353 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
SHC1P29353 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC14.93□□□□□ -0.02
SHC1P29353 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
SHC1P29353 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SHC1P29353 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC14.93□□□□□ -0.02
SHC1P29353 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
SHC1P29353 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SHC1P29353 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
SHC1P29353 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC14.92□□□□□ -0.02
SHC1P29353 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SHC1P29353 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC14.92□□□□□ -0.02
SHC1P29353 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SHC1P29353 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SHC1P29353 DPM2-202ENST00000373110 738 ntTSL 2 BASIC14.92□□□□□ -0.02
SHC1P29353 AL671277.1-201ENST00000429656 993 ntBASIC14.92□□□□□ -0.02
SHC1P29353 KRT8P48-201ENST00000515599 1220 ntBASIC14.92□□□□□ -0.02
SHC1P29353 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC14.92□□□□□ -0.02
SHC1P29353 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC14.92□□□□□ -0.02
SHC1P29353 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC14.92□□□□□ -0.02
SHC1P29353 RARRES2P8-201ENST00000566335 367 ntBASIC14.92□□□□□ -0.02
SHC1P29353 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC14.92□□□□□ -0.02
SHC1P29353 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
SHC1P29353 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC14.92□□□□□ -0.02
SHC1P29353 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SHC1P29353 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC14.92□□□□□ -0.02
SHC1P29353 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SHC1P29353 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC14.92□□□□□ -0.02
SHC1P29353 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SHC1P29353 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
SHC1P29353 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SHC1P29353 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SHC1P29353 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC14.92□□□□□ -0.02
SHC1P29353 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SHC1P29353 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC14.92□□□□□ -0.02
SHC1P29353 VILL-207ENST00000465644 1857 ntTSL 5 BASIC14.92□□□□□ -0.02
SHC1P29353 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC14.92□□□□□ -0.02
SHC1P29353 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SHC1P29353 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SHC1P29353 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SHC1P29353 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SHC1P29353 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
SHC1P29353 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
SHC1P29353 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SHC1P29353 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SHC1P29353 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SHC1P29353 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
SHC1P29353 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SHC1P29353 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SHC1P29353 AC104640.1-201ENST00000562617 2109 ntBASIC14.92□□□□□ -0.02
SHC1P29353 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC14.92□□□□□ -0.02
SHC1P29353 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
SHC1P29353 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC14.92□□□□□ -0.02
SHC1P29353 WASH6P-202ENST00000359512 1437 ntBASIC14.92□□□□□ -0.02
SHC1P29353 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SHC1P29353 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
SHC1P29353 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC14.91□□□□□ -0.02
SHC1P29353 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SHC1P29353 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SHC1P29353 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
SHC1P29353 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
SHC1P29353 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
SHC1P29353 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC14.91□□□□□ -0.02
SHC1P29353 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC14.91□□□□□ -0.02
SHC1P29353 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
SHC1P29353 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
SHC1P29353 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SHC1P29353 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SHC1P29353 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SHC1P29353 TFAMP1-201ENST00000412727 736 ntBASIC14.91□□□□□ -0.02
SHC1P29353 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
SHC1P29353 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC14.91□□□□□ -0.02
SHC1P29353 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
SHC1P29353 AL135744.1-201ENST00000565098 629 ntBASIC14.91□□□□□ -0.02
SHC1P29353 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC14.91□□□□□ -0.02
SHC1P29353 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC14.91□□□□□ -0.02
SHC1P29353 RPS15-207ENST00000591032 550 ntTSL 3 BASIC14.91□□□□□ -0.02
SHC1P29353 RPS15-212ENST00000593052 629 ntTSL 2 BASIC14.91□□□□□ -0.02
SHC1P29353 AL161645.1-201ENST00000622716 1255 ntBASIC14.91□□□□□ -0.02
SHC1P29353 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
SHC1P29353 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC14.91□□□□□ -0.02
SHC1P29353 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SHC1P29353 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
SHC1P29353 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
SHC1P29353 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SHC1P29353 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
SHC1P29353 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
SHC1P29353 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SHC1P29353 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 53.5 ms