Protein–RNA interactions for Protein: P23763

VAMP1, Vesicle-associated membrane protein 1, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1P23763 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
VAMP1P23763 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
VAMP1P23763 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC13.79□□□□□ -0.2
VAMP1P23763 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
VAMP1P23763 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
VAMP1P23763 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
VAMP1P23763 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC13.78□□□□□ -0.2
VAMP1P23763 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
VAMP1P23763 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
VAMP1P23763 SNX33P1-201ENST00000592116 1762 ntBASIC13.78□□□□□ -0.2
VAMP1P23763 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
VAMP1P23763 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
VAMP1P23763 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
VAMP1P23763 AC138035.3-201ENST00000622706 2791 ntBASIC13.78□□□□□ -0.2
VAMP1P23763 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
VAMP1P23763 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
VAMP1P23763 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC13.78□□□□□ -0.2
VAMP1P23763 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC13.78□□□□□ -0.2
VAMP1P23763 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
VAMP1P23763 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
VAMP1P23763 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
VAMP1P23763 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
VAMP1P23763 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
VAMP1P23763 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC13.78□□□□□ -0.2
VAMP1P23763 DENND3-207ENST00000518347 850 ntTSL 2 BASIC13.78□□□□□ -0.2
VAMP1P23763 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
VAMP1P23763 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
VAMP1P23763 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC13.78□□□□□ -0.2
VAMP1P23763 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC13.78□□□□□ -0.2
VAMP1P23763 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC13.78□□□□□ -0.2
VAMP1P23763 WDR6-223ENST00000627177 207 ntTSL 2 BASIC13.78□□□□□ -0.2
VAMP1P23763 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC13.78□□□□□ -0.2
VAMP1P23763 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC13.78□□□□□ -0.2
VAMP1P23763 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
VAMP1P23763 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
VAMP1P23763 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC13.78□□□□□ -0.2
VAMP1P23763 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC13.78□□□□□ -0.2
VAMP1P23763 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC13.78□□□□□ -0.2
VAMP1P23763 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
VAMP1P23763 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC13.78□□□□□ -0.2
VAMP1P23763 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
VAMP1P23763 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
VAMP1P23763 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
VAMP1P23763 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
VAMP1P23763 AC016027.1-202ENST00000607927 1699 ntBASIC13.78□□□□□ -0.2
VAMP1P23763 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
VAMP1P23763 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
VAMP1P23763 DKFZP434H168-201ENST00000567381 1905 ntBASIC13.78□□□□□ -0.2
VAMP1P23763 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC13.78□□□□□ -0.2
VAMP1P23763 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
VAMP1P23763 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC13.78□□□□□ -0.2
VAMP1P23763 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC13.78□□□□□ -0.2
VAMP1P23763 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
VAMP1P23763 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
VAMP1P23763 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
VAMP1P23763 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.2
VAMP1P23763 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.2
VAMP1P23763 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
VAMP1P23763 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
VAMP1P23763 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
VAMP1P23763 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.2
VAMP1P23763 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC13.77□□□□□ -0.2
VAMP1P23763 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.2
VAMP1P23763 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
VAMP1P23763 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
VAMP1P23763 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
VAMP1P23763 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
VAMP1P23763 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
VAMP1P23763 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
VAMP1P23763 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
VAMP1P23763 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
VAMP1P23763 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
VAMP1P23763 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
VAMP1P23763 GSN-203ENST00000373808 2664 ntTSL 2 BASIC13.77□□□□□ -0.21
VAMP1P23763 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
VAMP1P23763 MIR648-201ENST00000385046 94 ntBASIC13.77□□□□□ -0.21
VAMP1P23763 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC13.77□□□□□ -0.21
VAMP1P23763 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
VAMP1P23763 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
VAMP1P23763 DANCR-204ENST00000444958 709 ntTSL 3 BASIC13.77□□□□□ -0.21
VAMP1P23763 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC13.77□□□□□ -0.21
VAMP1P23763 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC13.77□□□□□ -0.21
VAMP1P23763 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
VAMP1P23763 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC13.77□□□□□ -0.21
VAMP1P23763 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
VAMP1P23763 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
VAMP1P23763 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
VAMP1P23763 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
VAMP1P23763 AC148477.5-201ENST00000625164 1645 ntBASIC13.77□□□□□ -0.21
VAMP1P23763 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
VAMP1P23763 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
VAMP1P23763 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
VAMP1P23763 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
VAMP1P23763 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC13.77□□□□□ -0.21
VAMP1P23763 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
VAMP1P23763 AC106881.1-201ENST00000605849 3329 ntBASIC13.77□□□□□ -0.21
VAMP1P23763 AC104581.4-201ENST00000623126 3052 ntBASIC13.77□□□□□ -0.21
VAMP1P23763 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
VAMP1P23763 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
VAMP1P23763 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms