Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC13.93□□□□□ -0.18
TNFSF4P23510 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TNFSF4P23510 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TNFSF4P23510 GOLGA6L17P-202ENST00000614358 1398 ntBASIC13.93□□□□□ -0.18
TNFSF4P23510 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC13.93□□□□□ -0.18
TNFSF4P23510 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC13.93□□□□□ -0.18
TNFSF4P23510 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TNFSF4P23510 AC011676.5-201ENST00000624864 2660 ntBASIC13.93□□□□□ -0.18
TNFSF4P23510 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC13.93□□□□□ -0.18
TNFSF4P23510 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC13.93□□□□□ -0.18
TNFSF4P23510 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC13.93□□□□□ -0.18
TNFSF4P23510 AGGF1P2-201ENST00000426656 2106 ntBASIC13.93□□□□□ -0.18
TNFSF4P23510 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
TNFSF4P23510 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC13.93□□□□□ -0.18
TNFSF4P23510 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TNFSF4P23510 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
TNFSF4P23510 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TNFSF4P23510 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
TNFSF4P23510 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
TNFSF4P23510 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
TNFSF4P23510 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
TNFSF4P23510 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
TNFSF4P23510 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC13.92□□□□□ -0.18
TNFSF4P23510 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
TNFSF4P23510 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
TNFSF4P23510 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
TNFSF4P23510 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
TNFSF4P23510 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TNFSF4P23510 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
TNFSF4P23510 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC13.92□□□□□ -0.18
TNFSF4P23510 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
TNFSF4P23510 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
TNFSF4P23510 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC13.92□□□□□ -0.18
TNFSF4P23510 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC13.92□□□□□ -0.18
TNFSF4P23510 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC13.92□□□□□ -0.18
TNFSF4P23510 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TNFSF4P23510 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
TNFSF4P23510 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TNFSF4P23510 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
TNFSF4P23510 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
TNFSF4P23510 MIR346-201ENST00000362234 95 ntBASIC13.92□□□□□ -0.18
TNFSF4P23510 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
TNFSF4P23510 SPDYE7P-202ENST00000420373 878 ntBASIC13.92□□□□□ -0.18
TNFSF4P23510 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC13.92□□□□□ -0.18
TNFSF4P23510 RBPMS2P1-201ENST00000437762 623 ntBASIC13.92□□□□□ -0.18
TNFSF4P23510 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
TNFSF4P23510 RNA5SP410-201ENST00000516285 106 ntBASIC13.92□□□□□ -0.18
TNFSF4P23510 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC13.92□□□□□ -0.18
TNFSF4P23510 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
TNFSF4P23510 SLC25A39P2-201ENST00000537614 270 ntBASIC13.92□□□□□ -0.18
TNFSF4P23510 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC13.92□□□□□ -0.18
TNFSF4P23510 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC13.92□□□□□ -0.18
TNFSF4P23510 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC13.92□□□□□ -0.18
TNFSF4P23510 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC13.92□□□□□ -0.18
TNFSF4P23510 AC084121.4-201ENST00000641598 221 ntBASIC13.92□□□□□ -0.18
TNFSF4P23510 AF228730.8-201ENST00000642140 221 ntBASIC13.92□□□□□ -0.18
TNFSF4P23510 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TNFSF4P23510 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TNFSF4P23510 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
TNFSF4P23510 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TNFSF4P23510 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TNFSF4P23510 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TNFSF4P23510 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TNFSF4P23510 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TNFSF4P23510 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC13.92□□□□□ -0.18
TNFSF4P23510 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
TNFSF4P23510 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TNFSF4P23510 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
TNFSF4P23510 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC13.92□□□□□ -0.18
TNFSF4P23510 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TNFSF4P23510 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
TNFSF4P23510 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
TNFSF4P23510 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC13.91□□□□□ -0.18
TNFSF4P23510 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
TNFSF4P23510 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
TNFSF4P23510 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC13.91□□□□□ -0.18
TNFSF4P23510 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
TNFSF4P23510 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
TNFSF4P23510 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TNFSF4P23510 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC13.91□□□□□ -0.18
TNFSF4P23510 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
TNFSF4P23510 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC13.91□□□□□ -0.18
TNFSF4P23510 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
TNFSF4P23510 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
TNFSF4P23510 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TNFSF4P23510 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
TNFSF4P23510 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
TNFSF4P23510 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
TNFSF4P23510 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
TNFSF4P23510 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
TNFSF4P23510 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
TNFSF4P23510 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TNFSF4P23510 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TNFSF4P23510 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TNFSF4P23510 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
TNFSF4P23510 HNRNPFP1-201ENST00000391730 1133 ntBASIC13.91□□□□□ -0.18
TNFSF4P23510 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC13.91□□□□□ -0.18
TNFSF4P23510 RPL30-202ENST00000396070 440 ntTSL 2 BASIC13.91□□□□□ -0.18
TNFSF4P23510 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
TNFSF4P23510 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC13.91□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms