Protein–RNA interactions for Protein: P22894

MMP8, Neutrophil collagenase, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP8P22894 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
MMP8P22894 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC17.03■□□□□ 0.32
MMP8P22894 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
MMP8P22894 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC17.03■□□□□ 0.32
MMP8P22894 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
MMP8P22894 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC17.03■□□□□ 0.32
MMP8P22894 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC17.03■□□□□ 0.32
MMP8P22894 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC17.03■□□□□ 0.32
MMP8P22894 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC17.03■□□□□ 0.32
MMP8P22894 CCND1-203ENST00000536559 553 ntTSL 3 BASIC17.03■□□□□ 0.32
MMP8P22894 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC17.03■□□□□ 0.32
MMP8P22894 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC17.03■□□□□ 0.32
MMP8P22894 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC17.03■□□□□ 0.32
MMP8P22894 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
MMP8P22894 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
MMP8P22894 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
MMP8P22894 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
MMP8P22894 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
MMP8P22894 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
MMP8P22894 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
MMP8P22894 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
MMP8P22894 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
MMP8P22894 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC17.03■□□□□ 0.32
MMP8P22894 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC17.03■□□□□ 0.32
MMP8P22894 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
MMP8P22894 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
MMP8P22894 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
MMP8P22894 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
MMP8P22894 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
MMP8P22894 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
MMP8P22894 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC17.02■□□□□ 0.32
MMP8P22894 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
MMP8P22894 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
MMP8P22894 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
MMP8P22894 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
MMP8P22894 ACE-204ENST00000428043 5120 ntTSL 2 BASIC17.02■□□□□ 0.32
MMP8P22894 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
MMP8P22894 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
MMP8P22894 VILL-207ENST00000465644 1857 ntTSL 5 BASIC17.02■□□□□ 0.32
MMP8P22894 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.32
MMP8P22894 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
MMP8P22894 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC17.02■□□□□ 0.32
MMP8P22894 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
MMP8P22894 AL627223.1-201ENST00000416693 442 ntBASIC17.02■□□□□ 0.32
MMP8P22894 FAM58DP-201ENST00000428076 619 ntBASIC17.02■□□□□ 0.32
MMP8P22894 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC17.02■□□□□ 0.32
MMP8P22894 AP000344.2-201ENST00000512987 629 ntBASIC17.02■□□□□ 0.32
MMP8P22894 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC17.02■□□□□ 0.32
MMP8P22894 TSFM-210ENST00000550559 897 ntTSL 5 BASIC17.02■□□□□ 0.32
MMP8P22894 AC243562.2-201ENST00000561247 970 ntBASIC17.02■□□□□ 0.32
MMP8P22894 RARRES2P9-201ENST00000565168 469 ntBASIC17.02■□□□□ 0.32
MMP8P22894 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC17.02■□□□□ 0.32
MMP8P22894 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
MMP8P22894 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC17.02■□□□□ 0.32
MMP8P22894 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC17.02■□□□□ 0.32
MMP8P22894 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
MMP8P22894 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
MMP8P22894 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
MMP8P22894 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
MMP8P22894 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC17.02■□□□□ 0.32
MMP8P22894 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
MMP8P22894 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
MMP8P22894 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
MMP8P22894 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC17.02■□□□□ 0.31
MMP8P22894 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
MMP8P22894 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
MMP8P22894 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
MMP8P22894 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
MMP8P22894 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
MMP8P22894 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC17.01■□□□□ 0.31
MMP8P22894 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
MMP8P22894 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC17.01■□□□□ 0.31
MMP8P22894 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
MMP8P22894 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
MMP8P22894 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
MMP8P22894 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC17.01■□□□□ 0.31
MMP8P22894 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
MMP8P22894 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC17.01■□□□□ 0.31
MMP8P22894 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
MMP8P22894 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
MMP8P22894 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
MMP8P22894 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC17.01■□□□□ 0.31
MMP8P22894 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
MMP8P22894 RPS8P6-201ENST00000426177 609 ntBASIC17.01■□□□□ 0.31
MMP8P22894 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC17.01■□□□□ 0.31
MMP8P22894 AC005237.2-201ENST00000434368 219 ntBASIC17.01■□□□□ 0.31
MMP8P22894 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC17.01■□□□□ 0.31
MMP8P22894 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
MMP8P22894 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC17.01■□□□□ 0.31
MMP8P22894 EHF-205ENST00000527935 557 ntTSL 2 BASIC17.01■□□□□ 0.31
MMP8P22894 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC17.01■□□□□ 0.31
MMP8P22894 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC17.01■□□□□ 0.31
MMP8P22894 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
MMP8P22894 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
MMP8P22894 AL162727.3-201ENST00000635661 2787 ntBASIC17.01■□□□□ 0.31
MMP8P22894 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
MMP8P22894 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
MMP8P22894 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
MMP8P22894 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
MMP8P22894 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms