Protein–RNA interactions for Protein: P12838

DEFA4, Neutrophil defensin 4, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEFA4P12838 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
DEFA4P12838 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
DEFA4P12838 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC13.28□□□□□ -0.28
DEFA4P12838 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
DEFA4P12838 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
DEFA4P12838 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
DEFA4P12838 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
DEFA4P12838 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
DEFA4P12838 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
DEFA4P12838 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
DEFA4P12838 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC13.28□□□□□ -0.28
DEFA4P12838 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
DEFA4P12838 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC13.28□□□□□ -0.28
DEFA4P12838 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC13.28□□□□□ -0.28
DEFA4P12838 FAM197Y8-203ENST00000450145 560 ntBASIC13.28□□□□□ -0.28
DEFA4P12838 PAWRP1-201ENST00000451083 565 ntBASIC13.28□□□□□ -0.28
DEFA4P12838 AC087163.2-201ENST00000457299 853 ntBASIC13.28□□□□□ -0.28
DEFA4P12838 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC13.28□□□□□ -0.28
DEFA4P12838 RPS15P9-201ENST00000494093 319 ntBASIC13.28□□□□□ -0.28
DEFA4P12838 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC13.28□□□□□ -0.28
DEFA4P12838 AC136632.2-201ENST00000512891 861 ntBASIC13.28□□□□□ -0.28
DEFA4P12838 DUX4L17-201ENST00000557360 1267 ntBASIC13.28□□□□□ -0.28
DEFA4P12838 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
DEFA4P12838 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
DEFA4P12838 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
DEFA4P12838 AC005593.1-201ENST00000624894 515 ntBASIC13.28□□□□□ -0.28
DEFA4P12838 AP001350.2-201ENST00000625104 1094 ntBASIC13.28□□□□□ -0.28
DEFA4P12838 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC13.28□□□□□ -0.28
DEFA4P12838 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
DEFA4P12838 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
DEFA4P12838 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC13.28□□□□□ -0.28
DEFA4P12838 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
DEFA4P12838 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC13.28□□□□□ -0.28
DEFA4P12838 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
DEFA4P12838 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC13.28□□□□□ -0.28
DEFA4P12838 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
DEFA4P12838 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
DEFA4P12838 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
DEFA4P12838 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
DEFA4P12838 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
DEFA4P12838 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC13.28□□□□□ -0.28
DEFA4P12838 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
DEFA4P12838 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
DEFA4P12838 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
DEFA4P12838 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC13.28□□□□□ -0.28
DEFA4P12838 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
DEFA4P12838 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
DEFA4P12838 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
DEFA4P12838 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.28
DEFA4P12838 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC13.27□□□□□ -0.28
DEFA4P12838 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
DEFA4P12838 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
DEFA4P12838 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
DEFA4P12838 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
DEFA4P12838 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
DEFA4P12838 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
DEFA4P12838 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
DEFA4P12838 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.28
DEFA4P12838 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.28
DEFA4P12838 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC13.27□□□□□ -0.28
DEFA4P12838 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
DEFA4P12838 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
DEFA4P12838 AC004870.1-201ENST00000315132 882 ntBASIC13.27□□□□□ -0.29
DEFA4P12838 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC13.27□□□□□ -0.29
DEFA4P12838 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
DEFA4P12838 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
DEFA4P12838 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
DEFA4P12838 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.29
DEFA4P12838 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC13.27□□□□□ -0.29
DEFA4P12838 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC13.27□□□□□ -0.29
DEFA4P12838 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC13.27□□□□□ -0.29
DEFA4P12838 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC13.27□□□□□ -0.29
DEFA4P12838 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
DEFA4P12838 AL691432.3-201ENST00000621860 400 ntBASIC13.27□□□□□ -0.29
DEFA4P12838 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
DEFA4P12838 PGM5P2-202ENST00000637225 1043 ntBASIC13.27□□□□□ -0.29
DEFA4P12838 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
DEFA4P12838 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC13.27□□□□□ -0.29
DEFA4P12838 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
DEFA4P12838 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
DEFA4P12838 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
DEFA4P12838 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
DEFA4P12838 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC13.27□□□□□ -0.29
DEFA4P12838 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC13.27□□□□□ -0.29
DEFA4P12838 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC13.27□□□□□ -0.29
DEFA4P12838 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
DEFA4P12838 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
DEFA4P12838 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC13.27□□□□□ -0.29
DEFA4P12838 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC13.27□□□□□ -0.29
DEFA4P12838 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.29
DEFA4P12838 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
DEFA4P12838 HLA-DQB2-231ENST00000435145 2026 ntBASIC13.27□□□□□ -0.29
DEFA4P12838 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
DEFA4P12838 AL603832.2-201ENST00000566195 2125 ntBASIC13.27□□□□□ -0.29
DEFA4P12838 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
DEFA4P12838 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
DEFA4P12838 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC13.26□□□□□ -0.29
DEFA4P12838 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
DEFA4P12838 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
DEFA4P12838 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms