Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RAB40ALP0C0E4 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC15.3■□□□□ 0.04
RAB40ALP0C0E4 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
RAB40ALP0C0E4 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
RAB40ALP0C0E4 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC15.29■□□□□ 0.04
RAB40ALP0C0E4 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RAB40ALP0C0E4 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC15.29■□□□□ 0.04
RAB40ALP0C0E4 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RAB40ALP0C0E4 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC15.29■□□□□ 0.04
RAB40ALP0C0E4 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
RAB40ALP0C0E4 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RAB40ALP0C0E4 GGT4P-201ENST00000623672 1708 ntBASIC15.29■□□□□ 0.04
RAB40ALP0C0E4 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
RAB40ALP0C0E4 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC15.29■□□□□ 0.04
RAB40ALP0C0E4 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC15.29■□□□□ 0.04
RAB40ALP0C0E4 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RAB40ALP0C0E4 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RAB40ALP0C0E4 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RAB40ALP0C0E4 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
RAB40ALP0C0E4 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC15.29■□□□□ 0.04
RAB40ALP0C0E4 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
RAB40ALP0C0E4 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
RAB40ALP0C0E4 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RAB40ALP0C0E4 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RAB40ALP0C0E4 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RAB40ALP0C0E4 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC15.29■□□□□ 0.04
RAB40ALP0C0E4 GRAP-202ENST00000395635 834 ntTSL 2 BASIC15.29■□□□□ 0.04
RAB40ALP0C0E4 SPDYE17-201ENST00000412399 783 ntBASIC15.29■□□□□ 0.04
RAB40ALP0C0E4 RN7SL618P-201ENST00000477850 296 ntBASIC15.29■□□□□ 0.04
RAB40ALP0C0E4 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RAB40ALP0C0E4 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
RAB40ALP0C0E4 AP005018.1-201ENST00000525475 301 ntBASIC15.29■□□□□ 0.04
RAB40ALP0C0E4 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RAB40ALP0C0E4 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC15.29■□□□□ 0.04
RAB40ALP0C0E4 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
RAB40ALP0C0E4 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
RAB40ALP0C0E4 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RAB40ALP0C0E4 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
RAB40ALP0C0E4 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RAB40ALP0C0E4 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
RAB40ALP0C0E4 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
RAB40ALP0C0E4 PCDH8P1-201ENST00000428983 2773 ntBASIC15.29■□□□□ 0.04
RAB40ALP0C0E4 AL162727.3-201ENST00000635661 2787 ntBASIC15.29■□□□□ 0.04
RAB40ALP0C0E4 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC15.29■□□□□ 0.04
RAB40ALP0C0E4 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RAB40ALP0C0E4 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
RAB40ALP0C0E4 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
RAB40ALP0C0E4 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RAB40ALP0C0E4 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RAB40ALP0C0E4 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
RAB40ALP0C0E4 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RAB40ALP0C0E4 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RAB40ALP0C0E4 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC15.28■□□□□ 0.04
RAB40ALP0C0E4 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RAB40ALP0C0E4 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC15.28■□□□□ 0.04
RAB40ALP0C0E4 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC15.28■□□□□ 0.04
RAB40ALP0C0E4 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC15.28■□□□□ 0.04
RAB40ALP0C0E4 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
RAB40ALP0C0E4 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC15.28■□□□□ 0.04
RAB40ALP0C0E4 KRT8P12-202ENST00000472924 1397 ntBASIC15.28■□□□□ 0.04
RAB40ALP0C0E4 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
RAB40ALP0C0E4 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RAB40ALP0C0E4 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RAB40ALP0C0E4 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
RAB40ALP0C0E4 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC15.28■□□□□ 0.04
RAB40ALP0C0E4 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RAB40ALP0C0E4 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RAB40ALP0C0E4 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RAB40ALP0C0E4 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
RAB40ALP0C0E4 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RAB40ALP0C0E4 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RAB40ALP0C0E4 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RAB40ALP0C0E4 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
RAB40ALP0C0E4 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC15.28■□□□□ 0.04
RAB40ALP0C0E4 CCDC74BP1-201ENST00000508880 1123 ntBASIC15.28■□□□□ 0.04
RAB40ALP0C0E4 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC15.28■□□□□ 0.04
RAB40ALP0C0E4 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC15.28■□□□□ 0.04
RAB40ALP0C0E4 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
RAB40ALP0C0E4 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
RAB40ALP0C0E4 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
RAB40ALP0C0E4 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RAB40ALP0C0E4 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
RAB40ALP0C0E4 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
RAB40ALP0C0E4 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC15.28■□□□□ 0.04
RAB40ALP0C0E4 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
RAB40ALP0C0E4 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RAB40ALP0C0E4 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
RAB40ALP0C0E4 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
RAB40ALP0C0E4 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
RAB40ALP0C0E4 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC15.27■□□□□ 0.04
RAB40ALP0C0E4 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RAB40ALP0C0E4 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC15.27■□□□□ 0.04
RAB40ALP0C0E4 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
RAB40ALP0C0E4 AMT-206ENST00000458307 1860 ntTSL 2 BASIC15.27■□□□□ 0.04
RAB40ALP0C0E4 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
RAB40ALP0C0E4 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC15.27■□□□□ 0.04
RAB40ALP0C0E4 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RAB40ALP0C0E4 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
RAB40ALP0C0E4 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC15.27■□□□□ 0.04
RAB40ALP0C0E4 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC15.27■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms