Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 AL160237.2-201ENST00000556165 472 ntBASIC13.53□□□□□ -0.24
CTSDP07339 NKAPP1-205ENST00000585790 367 ntBASIC13.53□□□□□ -0.24
CTSDP07339 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CTSDP07339 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CTSDP07339 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CTSDP07339 AP001269.4-201ENST00000609611 512 ntBASIC13.53□□□□□ -0.24
CTSDP07339 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC13.53□□□□□ -0.24
CTSDP07339 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
CTSDP07339 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CTSDP07339 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC13.53□□□□□ -0.24
CTSDP07339 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC13.53□□□□□ -0.24
CTSDP07339 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CTSDP07339 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CTSDP07339 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CTSDP07339 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC13.53□□□□□ -0.24
CTSDP07339 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CTSDP07339 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
CTSDP07339 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
CTSDP07339 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CTSDP07339 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC13.53□□□□□ -0.24
CTSDP07339 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC13.53□□□□□ -0.24
CTSDP07339 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC13.53□□□□□ -0.24
CTSDP07339 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CTSDP07339 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CTSDP07339 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
CTSDP07339 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC13.52□□□□□ -0.24
CTSDP07339 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
CTSDP07339 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC13.52□□□□□ -0.24
CTSDP07339 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
CTSDP07339 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
CTSDP07339 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
CTSDP07339 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
CTSDP07339 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
CTSDP07339 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC13.52□□□□□ -0.24
CTSDP07339 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
CTSDP07339 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
CTSDP07339 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
CTSDP07339 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC13.52□□□□□ -0.24
CTSDP07339 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
CTSDP07339 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
CTSDP07339 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC13.52□□□□□ -0.25
CTSDP07339 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
CTSDP07339 NUS1P2-201ENST00000417358 873 ntBASIC13.52□□□□□ -0.25
CTSDP07339 ARTN-206ENST00000472435 402 ntTSL 3 BASIC13.52□□□□□ -0.25
CTSDP07339 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC13.52□□□□□ -0.25
CTSDP07339 PNN-202ENST00000553331 656 ntTSL 3 BASIC13.52□□□□□ -0.25
CTSDP07339 MPI-205ENST00000562606 1052 ntTSL 3 BASIC13.52□□□□□ -0.25
CTSDP07339 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC13.52□□□□□ -0.25
CTSDP07339 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CTSDP07339 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC13.52□□□□□ -0.25
CTSDP07339 AC099336.1-202ENST00000602961 463 ntBASIC13.52□□□□□ -0.25
CTSDP07339 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC13.52□□□□□ -0.25
CTSDP07339 AC004706.3-202ENST00000621574 984 ntBASIC13.52□□□□□ -0.25
CTSDP07339 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC13.52□□□□□ -0.25
CTSDP07339 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CTSDP07339 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC13.52□□□□□ -0.25
CTSDP07339 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
CTSDP07339 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CTSDP07339 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CTSDP07339 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC13.52□□□□□ -0.25
CTSDP07339 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
CTSDP07339 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CTSDP07339 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
CTSDP07339 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
CTSDP07339 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
CTSDP07339 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC13.52□□□□□ -0.25
CTSDP07339 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC13.52□□□□□ -0.25
CTSDP07339 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CTSDP07339 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
CTSDP07339 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC13.52□□□□□ -0.25
CTSDP07339 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CTSDP07339 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CTSDP07339 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CTSDP07339 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
CTSDP07339 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC13.52□□□□□ -0.25
CTSDP07339 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CTSDP07339 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
CTSDP07339 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
CTSDP07339 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC13.51□□□□□ -0.25
CTSDP07339 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CTSDP07339 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC13.51□□□□□ -0.25
CTSDP07339 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
CTSDP07339 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CTSDP07339 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CTSDP07339 AL009178.2-201ENST00000597278 2719 ntBASIC13.51□□□□□ -0.25
CTSDP07339 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC13.51□□□□□ -0.25
CTSDP07339 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC13.51□□□□□ -0.25
CTSDP07339 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CTSDP07339 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
CTSDP07339 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CTSDP07339 API5-202ENST00000420461 2009 ntTSL 2 BASIC13.51□□□□□ -0.25
CTSDP07339 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC13.51□□□□□ -0.25
CTSDP07339 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CTSDP07339 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
CTSDP07339 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CTSDP07339 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
CTSDP07339 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC13.51□□□□□ -0.25
CTSDP07339 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
CTSDP07339 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
CTSDP07339 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC13.51□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms