Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
CNOT4O95628 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CNOT4O95628 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CNOT4O95628 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CNOT4O95628 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
CNOT4O95628 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC14.47□□□□□ -0.09
CNOT4O95628 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC14.47□□□□□ -0.09
CNOT4O95628 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CNOT4O95628 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC14.47□□□□□ -0.09
CNOT4O95628 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CNOT4O95628 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
CNOT4O95628 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC14.47□□□□□ -0.09
CNOT4O95628 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
CNOT4O95628 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC14.47□□□□□ -0.09
CNOT4O95628 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC14.47□□□□□ -0.09
CNOT4O95628 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC14.47□□□□□ -0.09
CNOT4O95628 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CNOT4O95628 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
CNOT4O95628 PRR29-209ENST00000582540 967 ntTSL 2 BASIC14.47□□□□□ -0.09
CNOT4O95628 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC14.47□□□□□ -0.09
CNOT4O95628 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
CNOT4O95628 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC14.47□□□□□ -0.09
CNOT4O95628 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CNOT4O95628 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CNOT4O95628 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CNOT4O95628 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CNOT4O95628 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC14.47□□□□□ -0.09
CNOT4O95628 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
CNOT4O95628 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC14.47□□□□□ -0.09
CNOT4O95628 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CNOT4O95628 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
CNOT4O95628 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
CNOT4O95628 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CNOT4O95628 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC14.47□□□□□ -0.09
CNOT4O95628 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
CNOT4O95628 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CNOT4O95628 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CNOT4O95628 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
CNOT4O95628 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CNOT4O95628 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CNOT4O95628 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CNOT4O95628 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CNOT4O95628 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC14.46□□□□□ -0.09
CNOT4O95628 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CNOT4O95628 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CNOT4O95628 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC14.46□□□□□ -0.09
CNOT4O95628 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
CNOT4O95628 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
CNOT4O95628 AC018695.7-201ENST00000624587 2492 ntBASIC14.46□□□□□ -0.09
CNOT4O95628 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CNOT4O95628 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC14.46□□□□□ -0.09
CNOT4O95628 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC14.46□□□□□ -0.09
CNOT4O95628 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
CNOT4O95628 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC14.46□□□□□ -0.09
CNOT4O95628 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC14.46□□□□□ -0.09
CNOT4O95628 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC14.46□□□□□ -0.09
CNOT4O95628 AC026150.2-201ENST00000564693 1156 ntBASIC14.46□□□□□ -0.09
CNOT4O95628 AC024267.1-201ENST00000582320 895 ntBASIC14.46□□□□□ -0.09
CNOT4O95628 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CNOT4O95628 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CNOT4O95628 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CNOT4O95628 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC14.46□□□□□ -0.09
CNOT4O95628 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CNOT4O95628 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC14.46□□□□□ -0.09
CNOT4O95628 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC14.46□□□□□ -0.09
CNOT4O95628 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CNOT4O95628 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
CNOT4O95628 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CNOT4O95628 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
CNOT4O95628 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CNOT4O95628 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CNOT4O95628 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC14.46□□□□□ -0.09
CNOT4O95628 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
CNOT4O95628 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC14.46□□□□□ -0.1
CNOT4O95628 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
CNOT4O95628 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
CNOT4O95628 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC14.46□□□□□ -0.1
CNOT4O95628 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.1
CNOT4O95628 CES3-203ENST00000543856 3178 ntTSL 2 BASIC14.46□□□□□ -0.1
CNOT4O95628 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
CNOT4O95628 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC14.46□□□□□ -0.1
CNOT4O95628 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC14.46□□□□□ -0.1
CNOT4O95628 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
CNOT4O95628 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
CNOT4O95628 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.1
CNOT4O95628 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC14.46□□□□□ -0.1
CNOT4O95628 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.1
CNOT4O95628 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
CNOT4O95628 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CNOT4O95628 UBALD1-205ENST00000590891 2641 ntBASIC14.45□□□□□ -0.1
CNOT4O95628 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CNOT4O95628 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CNOT4O95628 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CNOT4O95628 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC14.45□□□□□ -0.1
CNOT4O95628 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC14.45□□□□□ -0.1
CNOT4O95628 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC14.45□□□□□ -0.1
CNOT4O95628 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC14.45□□□□□ -0.1
CNOT4O95628 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CNOT4O95628 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
CNOT4O95628 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms