Protein–RNA interactions for Protein: O75427

LRCH4, Leucine-rich repeat and calponin homology domain-containing protein 4, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH4O75427 DNAJB3-201ENST00000446806 729 ntBASIC16.87■□□□□ 0.29
LRCH4O75427 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
LRCH4O75427 YBX1P5-201ENST00000509441 847 ntBASIC16.87■□□□□ 0.29
LRCH4O75427 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC16.87■□□□□ 0.29
LRCH4O75427 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC16.87■□□□□ 0.29
LRCH4O75427 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC16.87■□□□□ 0.29
LRCH4O75427 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC16.87■□□□□ 0.29
LRCH4O75427 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC16.87■□□□□ 0.29
LRCH4O75427 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC16.87■□□□□ 0.29
LRCH4O75427 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
LRCH4O75427 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
LRCH4O75427 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC16.87■□□□□ 0.29
LRCH4O75427 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
LRCH4O75427 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC16.87■□□□□ 0.29
LRCH4O75427 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
LRCH4O75427 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC16.86■□□□□ 0.29
LRCH4O75427 AP003680.1-201ENST00000598970 3660 ntBASIC16.86■□□□□ 0.29
LRCH4O75427 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LRCH4O75427 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
LRCH4O75427 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LRCH4O75427 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
LRCH4O75427 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
LRCH4O75427 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LRCH4O75427 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LRCH4O75427 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LRCH4O75427 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LRCH4O75427 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC16.86■□□□□ 0.29
LRCH4O75427 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LRCH4O75427 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
LRCH4O75427 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC16.86■□□□□ 0.29
LRCH4O75427 COX10-202ENST00000429152 875 ntTSL 2 BASIC16.86■□□□□ 0.29
LRCH4O75427 CEND1P1-201ENST00000451006 455 ntBASIC16.86■□□□□ 0.29
LRCH4O75427 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC16.86■□□□□ 0.29
LRCH4O75427 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
LRCH4O75427 IGHV3-62-201ENST00000520057 340 ntBASIC16.86■□□□□ 0.29
LRCH4O75427 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LRCH4O75427 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC16.86■□□□□ 0.29
LRCH4O75427 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LRCH4O75427 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC16.86■□□□□ 0.29
LRCH4O75427 AC022145.2-201ENST00000598203 171 ntBASIC16.86■□□□□ 0.29
LRCH4O75427 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC16.86■□□□□ 0.29
LRCH4O75427 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC16.86■□□□□ 0.29
LRCH4O75427 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
LRCH4O75427 AC105339.1-204ENST00000636249 355 ntBASIC16.86■□□□□ 0.29
LRCH4O75427 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
LRCH4O75427 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC16.86■□□□□ 0.29
LRCH4O75427 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
LRCH4O75427 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
LRCH4O75427 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LRCH4O75427 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LRCH4O75427 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC16.86■□□□□ 0.29
LRCH4O75427 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
LRCH4O75427 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LRCH4O75427 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
LRCH4O75427 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
LRCH4O75427 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LRCH4O75427 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LRCH4O75427 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
LRCH4O75427 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC16.86■□□□□ 0.29
LRCH4O75427 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LRCH4O75427 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC16.85■□□□□ 0.29
LRCH4O75427 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
LRCH4O75427 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC16.85■□□□□ 0.29
LRCH4O75427 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
LRCH4O75427 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
LRCH4O75427 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
LRCH4O75427 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
LRCH4O75427 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC16.85■□□□□ 0.29
LRCH4O75427 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
LRCH4O75427 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
LRCH4O75427 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
LRCH4O75427 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
LRCH4O75427 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
LRCH4O75427 WARS-232ENST00000556645 2508 ntTSL 5 BASIC16.85■□□□□ 0.29
LRCH4O75427 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
LRCH4O75427 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
LRCH4O75427 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC16.85■□□□□ 0.29
LRCH4O75427 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
LRCH4O75427 AL592309.1-201ENST00000443127 649 ntBASIC16.85■□□□□ 0.29
LRCH4O75427 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC16.85■□□□□ 0.29
LRCH4O75427 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
LRCH4O75427 RNA5SP410-201ENST00000516285 106 ntBASIC16.85■□□□□ 0.29
LRCH4O75427 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC16.85■□□□□ 0.29
LRCH4O75427 SLC25A39P2-201ENST00000537614 270 ntBASIC16.85■□□□□ 0.29
LRCH4O75427 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC16.85■□□□□ 0.29
LRCH4O75427 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC16.85■□□□□ 0.29
LRCH4O75427 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
LRCH4O75427 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC16.85■□□□□ 0.29
LRCH4O75427 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
LRCH4O75427 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
LRCH4O75427 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC16.85■□□□□ 0.29
LRCH4O75427 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC16.85■□□□□ 0.29
LRCH4O75427 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
LRCH4O75427 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
LRCH4O75427 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
LRCH4O75427 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
LRCH4O75427 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
LRCH4O75427 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
LRCH4O75427 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
LRCH4O75427 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC16.85■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 70.5 ms